Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0142 ATGGAGCCAACACCTCCCTGCACCCGCGACGATGACCTAACAGCCGCCGTCTCCTCCACCACCATTGAGCTGGTTGACAAATCTGATAACTCACGAGTCGGAGGCACGCGCCACCCTGTCTACAGGGGCGTCCGTAAGCGGCGCTGGGGCAAATGGGTGTCCGAAATCCGGGAGCCACGCAAGAAATCGCGAATATGGCTGGGGTCATTTCCGGTACCGGAGATGGCGGCGAAGGCATATGACGTGGCGGCGTATTGCCTGAAAGGCAGGAAGGCGCAGCTCAATTTCCCCGACGAGGTCGACCTCTTGCCGCGGCCGTCTACATGTGCCGCCAGAGATATTCAGGAGGCGGCAGCGAAGGCAGCTCATGCAATGAAAGCCTCCGTGAAGAAGAATAGCATTATGTCTGACGGCGACAGTGGGGGAGATGATTTTTGGGGCGAGATTGAATTACCAGAGCTGATGAACAGCGGGTGTTTCTGGAGTTCTCCGAGTGGGTCATCGTGGGCTACTTCCAGCGACATCACGGCATGGCCGGAGATGGAGCTTCCGTCGCAGCAGCAACTGTTCATGGCGTGCTTATAA 585 0.5778 MEPTPPCTRDDDLTAAVSSTTIELVDKSDNSRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVDLLPRPSTCAARDIQEAAAKAAHAMKASVKKNSIMSDGDSGGDDFWGEIELPELMNSGCFWSSPSGSSWATSSDITAWPEMELPSQQQLFMACL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0142 194 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Acco07g0142 194 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700|GO:0006355
Acco07g0142 194 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Acco07g0142 194 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Acco07g0142 194 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 154 - -
Acco07g0142 194 CDD AP2 41 98 IPR001471 GO:0003700|GO:0006355
Acco07g0142 194 SUPERFAMILY DNA-binding domain 40 99 IPR016177 GO:0003677
Acco07g0142 194 FunFam Ethylene-responsive transcription factor 2 39 98 - -
Acco07g0142 194 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Acco07g0142 194 Pfam AP2 domain 39 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0142 Acco-ChrAcco07 1455525 1456109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0142 4 194 AP2-EREBP Transcription Factor Family AT1G01250 57.143 2.33e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco07g0142 AP2 1.9e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0142 07 1455525 1456109 Acco07g0142 07 1455525 1456109 ECH