Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0141 ATGAAGCTTGAGTTGGGCTTAGGAGGTGTGTTGTGGAATGATGAAGAAAAAGCCATGGTTGCATCAGTTCTGGGAAATCGAGCTTTTGAATACTTGTTCACAAACCCTGTGGCGAGCGACAATTTGTTAATGACAGTCGGAAGCGACGAAAGTTTACAGAACAAGCTTTCGGATCTCGTGGACCGTCCAAACGTATCGAATTTTAGTTGGAACTACGCTATTTTCTGGCAAATATCACAGTCGAAGAATTCTGGGGATTGGGTTTTGGGTTGGGGAGATGGATGCTGCAGAGAACCCAAGGGAGAAGAAGAGGAAGGCAAAGTTAGAAGGCTTCTTACTCTTCGCGTGGAAAAAGATGAGATGCAGCAGATGATTAGGAAAGGGGTGCTTCAGAAGCTCCATACAACATTTGGGGGTTCTGATGAAGACAATTATGCCTTTGGATTAGATAGGGTTACTGACACAGAAATGTTCTTCCTGGCTTCCATGTACTTCTCCTTCCCTCGAGGCCATGGTGGTCCTGGTAAATGCCTTGCTTCAGGGAAGCATGTTTGGTACCCTGATGCACTTAGCTCTGATTACTGTGTGAGATCATTTTTGACAAAATCAGCTGGAATTCAGACCATAGTTTTGGTCCCTACTGACGTAGGGGTTGTGGAATTGGGTTCTGTGAGGACAATAGGAGAGAGCTCAGAATTGTTGCAGGTGATAAAATCAGAGTTTTCCGCGCAATTGTCAATTCCTAGGGTTTCCCCACTTTCGCCATTGCCTGTTGCGGTGAATGAGAAGAGAGATGAAAATGGTGTCTTTCATGGTTTGCCAGTGGGGAATAAGGTGGATGGAGTTCCAAAGATTTTTGGACAGGACATGAACTCTTTAAACACTGCTCGTCCCCATTTTAGGGAGAAGCTTGCTGTGAGGAAGATGGAGGAGAGACCTTGGATAGGTCATAGCCAACCCAATGGTAATATTAGCTTTCCAGGTGTGCGAAATGGTATTCACGGATCAAGTTGGGCTGCTAATCAGGGCAGGAAACAGGCTACCCCAACTGAGGCTCATCCTTCAACGTCTTCAGGTTGCAATGCATCGGAGGGAGTTAACCAGTTTAGGCAAGATTTTCGGCTTAGCAACTACCAACCACAAAGGCAGGTGCAAATGCAAATTGATTTCTCTGGAACCACTTCAAGGCCTTCTGTGAGACCAATCAATGCTGAATCAGAGCTATCTGATGTTGAAGCTTCCTGCAAAGGAGATCAGCTGGGTGCAACAGATGAAAGGAGGCCGAGGAAACGGGGTAGAAAGCCTGCCAATGGAAGGGAAGAACCCTTGAATCATGTGGAAGCAGAGAGGCAGAGGCGTGAGAAGCTGAATCAGCGGTTCTATGCTCTTAGATCTGTTGTACCCAATATATCCAAGATGGACAAGGCTTCTCTGCTGGGAGATGCCATTGCCTATATCCATGAGCTTCAAGCAAAACTCAAGGTCATGGAATCTGAGAGGGAGATATCTGGAAGCACTTCAAGAGATGTGCCAGCATCAGTGGCTGATCCAAAAGTAGAAAATCACAATCATGCTCCCGATGTTGATATTGAAGCTACCCAGGATGAGGTAATAGTGAGGGTGAGCAGCCCTCTCAATGCTCATCCTATTTCAAGGGTTATCCAAAAGTTAAAAGATGCACAAATTAATGTTGTTGAGTTGAAACTTGCAACTGCAAATGACACCATCTTCCATTCCTTTGTGGTCAAGTCTCAAGGATCTGAGCCGCTGACGAAGGAGAAGTTGATTGCAGCATTTTCTTGA 1803 0.4565 MKLELGLGGVLWNDEEKAMVASVLGNRAFEYLFTNPVASDNLLMTVGSDESLQNKLSDLVDRPNVSNFSWNYAIFWQISQSKNSGDWVLGWGDGCCREPKGEEEEGKVRRLLTLRVEKDEMQQMIRKGVLQKLHTTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGHGGPGKCLASGKHVWYPDALSSDYCVRSFLTKSAGIQTIVLVPTDVGVVELGSVRTIGESSELLQVIKSEFSAQLSIPRVSPLSPLPVAVNEKRDENGVFHGLPVGNKVDGVPKIFGQDMNSLNTARPHFREKLAVRKMEERPWIGHSQPNGNISFPGVRNGIHGSSWAANQGRKQATPTEAHPSTSSGCNASEGVNQFRQDFRLSNYQPQRQVQMQIDFSGTTSRPSVRPINAESELSDVEASCKGDQLGATDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYIHELQAKLKVMESEREISGSTSRDVPASVADPKVENHNHAPDVDIEATQDEVIVRVSSPLNAHPISRVIQKLKDAQINVVELKLATANDTIFHSFVVKSQGSEPLTKEKLIAAFS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0141 600 MobiDBLite consensus disorder prediction 501 523 - -
Acco07g0141 600 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 443 502 IPR036638 GO:0046983
Acco07g0141 600 MobiDBLite consensus disorder prediction 389 451 - -
Acco07g0141 600 MobiDBLite consensus disorder prediction 331 364 - -
Acco07g0141 600 Gene3D - 433 503 IPR036638 GO:0046983
Acco07g0141 600 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 440 489 IPR011598 GO:0046983
Acco07g0141 600 PANTHER MYC 41 598 IPR045084 GO:0003700|GO:0006355
Acco07g0141 600 CDD bHLH_AtAIB_like 437 502 - -
Acco07g0141 600 FunFam Transcription factor bHLH13 433 506 - -
Acco07g0141 600 SMART finulus 446 495 IPR011598 GO:0046983
Acco07g0141 600 MobiDBLite consensus disorder prediction 419 451 - -
Acco07g0141 600 Pfam Helix-loop-helix DNA-binding domain 444 490 IPR011598 GO:0046983
Acco07g0141 600 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 241 IPR025610 -
Acco07g0141 600 MobiDBLite consensus disorder prediction 335 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0141 Acco-ChrAcco07 1434163 1435965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0141 5 600 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 49.841 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco07g0141 bHLH-MYC_N 1.2e-51 CL0161