LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g0140	ATGGAATCCGAAACACGACGGAAAATCGAAGAAACGGTGCTGGATGTACTGAAGAATTCCAATATTGATGAAGCGACTGAGTTCACTGTCCGACTCGCGGCCTCGGAGCGACTAGGGATGGATCTTTCTGACTCGGAACACAAGCTTCTTGTGAGAGGCATTGTTGAGTCGTTTCTGCTCGCTATTGCTGAGCAAGAAGTTGGTAGAGTTCCGGCGTCTGGGCCGAGTGCTCCACAAGAGACAAGAGAGGTGGTGCAGTGTGAGCAGGAGGCGAAGCCAAACAAGGGGGTTACGAAGGACTCTGAGCACTTAATTTGCCAGCTATCTAACAAGAGGAATGTGGCGGTTCATGATTTCAGAGGGAAAAAGTTAGTCTCAATCAGGGACTATTATGTGAAAGATGGAAAACAGCTTCCTTCAGCTAAAGAGGAAGATGCTAACTTCCTAACAAAGGTGAGGAGTTTGCCGTCTGACCAATGGTCTGCCTTCAAGAAAAGTGTCCCTGCTATAGAGGAAGCCATTGCGAAGATGGAAGCAAAGATGGGATTCAAGGTTCACGGTAAGCAAAATGGAGATGTGCCAAACCCAACTCTTAGCAAGCACAATGGGGACGTGCTGGACCTAATTATTGATGCTGCTCCTCCTGAACCTATCCCTATTGAAATCGGCCGCTTTGATGGGAAAAATTACCATGTCTGGATTCAGCACATGGAATTACTCTTAAAGCAACTAAAGATTGCATATGTTCTCACGGAACTATGCCCAAATGCTACACCAGGACCACATTCAAGCGCTAAAGAAGTTGCTGAAGCCAGGGCAGCAGAAAAGAGATTTGAAAGCACTTATTACTGGTTTGTGGACATGTTCTGTGGTAAAAGTGGGTTGGATGAGATGGGGAAGGCCTTAACTGCAGCAATTCTAAAGTGTAACAGAGCTGAACATTGTTTAGCAGCATCAGTTACAAGTGTCTCACCTGGGCAAAAGAATAGCCACCGAAGAAAAAAGATAAAAAGTAAACATAATATTACCAGATTCACAAAGCTAGGACCTGTGATCCCTTTCAGTGCTACAAGCAGCAGAAATTCACTAAAATTTCGCTCTTATGCACAAAACTTGACATCATACAAGAAAGAACACAAGATATCGAAACACCAGGTGGAGTTCGTTAAACTAAACGAAATAATTCAATATGCAGGATTACTTTGTATGATGAAATGTGTATGCTATAAACAAACATAA	1239	0.4366	MESETRRKIEETVLDVLKNSNIDEATEFTVRLAASERLGMDLSDSEHKLLVRGIVESFLLAIAEQEVGRVPASGPSAPQETREVVQCEQEAKPNKGVTKDSEHLICQLSNKRNVAVHDFRGKKLVSIRDYYVKDGKQLPSAKEEDANFLTKVRSLPSDQWSAFKKSVPAIEEAIAKMEAKMGFKVHGKQNGDVPNPTLSKHNGDVLDLIIDAAPPEPIPIEIGRFDGKNYHVWIQHMELLLKQLKIAYVLTELCPNATPGPHSSAKEVAEARAAEKRFESTYYWFVDMFCGKSGLDEMGKALTAAILKCNRAEHCLAASVTSVSPGQKNSHRRKKIKSKHNITRFTKLGPVIPFSATSSRNSLKFRSYAQNLTSYKKEHKISKHQVEFVKLNEIIQYAGLLCMMKCVCYKQT	412

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g0140	412	Pfam	Transcriptional Coactivator p15 (PC4)	106	142	IPR003173	GO:0003677\|GO:0006355
	Acco07g0140	412	Pfam	DEK C terminal domain	5	59	IPR014876	-
	Acco07g0140	412	PANTHER	RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR	3	179	IPR045125	GO:0003713\|GO:0060261
	Acco07g0140	412	Gene3D	Transcriptional Coactivator Pc4; Chain A	96	181	IPR009044	GO:0003677\|GO:0006355
	Acco07g0140	412	SUPERFAMILY	ssDNA-binding transcriptional regulator domain	105	176	IPR009044	GO:0003677\|GO:0006355
	Acco07g0140	412	ProSiteProfiles	DEK C-terminal (DEK-C) domain profile.	3	60	IPR014876	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g0140	Acco-ChrAcco07	1423875	1433941	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Coactivator p15	Acco07g0140		DEK_C	1.3e-09	No_clan