Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0132 ATGGCTTCTTATATTGCTTCATGTTTAAATCTAAGTCTTGATAGTCTCAGGATGATAATTAAGCGGGCAATGAAATTTGAAATTCCGAATCTGAAGCGATGCCAATTAGAGGAGCTCGATCCTGAAGACAGTACCTGTGCGACGAATCCCAAGAAACGGAGGGCAAATGGTTTTTTATCTACTGGTATGGCCGCTGAGGATGAATATTTGAGCAGCAATTCTGGATTTCTTTGCAGTAAAGAATCGCATTGCGTTGGTGACTTACTGTCAAGCTCAGATTCCATGAAGTCGAATGCTAGAACAGTACTAAAACCGGGCTCAAAAAAGGTTTGGCCTCCATTATTGCGGTCGTCACGAGGTCGCCACCAGATACTTCCATCGAGGTTCAGGGATTCGGTTCTTGGTACGTGGAAGAATGAAAAAATCCAAGTGGAGAGCACATGTTCCATCGTTAAAGAAAGTGATTCTTTAGGGGAAGTTGAGTCAAAGTTCAGTAGAATGGAATTTGCAAAACAGGGAGCTTGTGTTAATAGTAGTCTAAGAAATTCAATCTGTTGTCCATATACCGAAATGGAGAAGGAAAGAGTCTTGGGTGCCTTAGATTCAAATGATTTCGACCCCGCGGACACGGAGCATGCGAAATCCTTTAGTACCGTGAGAACAACAGTTAAAGAGGGTTGCTCATCGTTACTTAAAGTTCAAAATTATGCGTCCGGACTTAATTCTGAAGGCACTATTGATCCAAAAACTAGTGGGAAAGCTGAAAAGAGGACAGACGTTTACAAACTAGAGGATTTTGCTTGCGGTGATATAGTTTGGGCAAAATGCGGGAAGAGGTATCCGGCCTGGCCTGCTATAGTGATTGATCCCATCTTGCAAGCTCCCAAGTCGGTCCTGAACTGTTGTGTTCCAGGTGCAATTTGCGTAATGTTTTTTGGGTACTCAAAAAATGGAAAGCAAAGGGACTATGCGTGGGTGAGAAAGGGAATGGTATTCCCCTTCATAGAATTGATGGACAGATTCCAGGGGCAGACCCGACTGTACAGGTGCAAACCAAGTGATTTTCGAATGGCACTAGAGGAGGCTTTGTTGGCAGAAGATGGTATTCTGGAGTCACATTTGGGAGCAGATATAGTTACTAAAAGTAATTTTGAAGCTCATCCCAGTGTAGATTTAGAGGTTACGGGTTCATATGATGATCAGGAGGACAACTGTCGGGACAAGGATGCTAGACTTTGTGCTGGCTGTGGTTTGATGTTAACATGCAAAGCCATGAAGAAGACTAAGGATTCTAGTGCACAACTTTATTGTAGACATTGCCTGAAGTTGCAAAAATCCAAACAATACTGCGGCATTTGCAAAAAGATTTGGCACCACTCAGATGGTGGGAATTGGGTATGTTGCGATGGTTGCAATGTTTGGGTGCATGCAGAATGTGATAAAATCTCCAGCAAACTTTTAAAGGATCTGGAACTTACGGATTACTATTGCCCAGATTGCAAAACAAAAGTCAAATGTAAATTTGCAGAATCACGTTCATCCAATTCAAAAATCAATTCAATAGAAAATAACCAAGAACATATGATACCTGAGGAGGTAACGGTGGTGTGCAATGGCATGGAAGGAATTTACAATCGAAGTCTTCATTCAGTTATGTGCAAATGTGGTTCATGTGGGTCAAGGAAGCAGACACTGGGTGAATGGGAGCGGCATACAGGTTGCAGAGCCAAAAAATGGAAATTCAGCGTGAAAGTAAAAAGCACAATGCTGCCCCTAGAAAAATGGATTACTGAGAACAATTCTCAAGCTGGGGTTTCCCTAAAGTTGGATCAGCAGAAGGTACTTGCCTTTTTGCAAGAGAAGTATGAACCAGTTTATGCAAAATGGACTACTGAAAGGTGTGCCATTTGTAGATGGGTTGAAGATTGGGATGACAACAAGATTATTATCTGTAACAGGTGCCAAATTGCTGTCCACCAAGAATGCTATGGGGTGAAGAAAGTTAAGGATTTTACTTCTTGGGTTTGTAGAGTTTGTGAAACTCCTGATGTTGAGAGAGAATGCTGCCTCTGTCCGGTAAAAGGTGGTGCTCTGAAGCCAACTGATGTTGACATGCTGTGGGTTCATATAACATGCGCTTGGTTTCAGCCTGAAGTTATTTTCCAAAACCACGAGGCAATGGAACCTGCCATTGGAATCCTTAAAATTCCTCCAAATTCGTTTTCAAAGATTTGCATTATCTGTAAACAAAGCCATGGATCATGCTTAAGTTGTTGCAAATGTGCTACTTATTTTCATGTGATGTGTGCGTCAAGAGCTGGATATAGCATGGAATTGCATTCCAAGGAGAAGAATGGGAGTCAGAGAACAACGAAGTTAATATATTGCGCAGTTCATAGGGCCCCAGAACCAGATTCAGTACTGGTTGTGCACACACCCTTGGGTGTTTTCTCTCCCAGAACTGAACTTCAAAATCATAAGGGATGCTTTAGGGGATCGAAGCTAGTTTCACCAAAGGAGGTAGAACTTCTCGAAGAGCCCTCAACCTCTGAGATTAACAAGTTTGAGCCACCTTCTGCTGCTAGATGTTGTGTTTACAGAAGGGCTCTTAATAAGAAAGTTGATAAGCCAGTAATTCACTTACTGGGCGGACCAAGACATCATTCTTTAAGTGGAATAACTCAGTTGAACAGTTATAAGGACGTTGAACTTTCTGATGTATTTCTTTCTCTCAAGGAACGCCTTTATCATTTGCAGAAAACTGTAAAGCATCAAGTTTGCTTTGGAAAATCTGGTATACATGGATGGGGCCTCTTTGCTCATCGAGATATTGAAGAAGGAGAGATGGTTGCTGAGTATTGTGGGGAGCAGGTAAGGCGGAGCATAGCTGATTTGAGGGAAGCAAAGTACCGGTCAGAAGGCAAAGATTGTTATCTGTTCAAGATCAGCGAGGAATTGGTAATTGATGCAACAGATAAGGGCAACATAACACGCTTGATAAACCATTCTTGCATGCCCAACTGCTATGCCAGGATAATAAGTTTGGATGATGAGGAGAGCCGAATTGTTCTTATTGCCAAGACCAATATCTCTGCTGGTGAAGAACTAACGTATGACTACTTGTTTGATCCGGATGAGCTTGATGAACTGAAAGTTCCCTGTCATTGCAATGCCCCAAATTGTAGGAAATTTATGAATTAG 3201 0.4208 MASYIASCLNLSLDSLRMIIKRAMKFEIPNLKRCQLEELDPEDSTCATNPKKRRANGFLSTGMAAEDEYLSSNSGFLCSKESHCVGDLLSSSDSMKSNARTVLKPGSKKVWPPLLRSSRGRHQILPSRFRDSVLGTWKNEKIQVESTCSIVKESDSLGEVESKFSRMEFAKQGACVNSSLRNSICCPYTEMEKERVLGALDSNDFDPADTEHAKSFSTVRTTVKEGCSSLLKVQNYASGLNSEGTIDPKTSGKAEKRTDVYKLEDFACGDIVWAKCGKRYPAWPAIVIDPILQAPKSVLNCCVPGAICVMFFGYSKNGKQRDYAWVRKGMVFPFIELMDRFQGQTRLYRCKPSDFRMALEEALLAEDGILESHLGADIVTKSNFEAHPSVDLEVTGSYDDQEDNCRDKDARLCAGCGLMLTCKAMKKTKDSSAQLYCRHCLKLQKSKQYCGICKKIWHHSDGGNWVCCDGCNVWVHAECDKISSKLLKDLELTDYYCPDCKTKVKCKFAESRSSNSKINSIENNQEHMIPEEVTVVCNGMEGIYNRSLHSVMCKCGSCGSRKQTLGEWERHTGCRAKKWKFSVKVKSTMLPLEKWITENNSQAGVSLKLDQQKVLAFLQEKYEPVYAKWTTERCAICRWVEDWDDNKIIICNRCQIAVHQECYGVKKVKDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVDMLWVHITCAWFQPEVIFQNHEAMEPAIGILKIPPNSFSKICIICKQSHGSCLSCCKCATYFHVMCASRAGYSMELHSKEKNGSQRTTKLIYCAVHRAPEPDSVLVVHTPLGVFSPRTELQNHKGCFRGSKLVSPKEVELLEEPSTSEINKFEPPSAARCCVYRRALNKKVDKPVIHLLGGPRHHSLSGITQLNSYKDVELSDVFLSLKERLYHLQKTVKHQVCFGKSGIHGWGLFAHRDIEEGEMVAEYCGEQVRRSIADLREAKYRSEGKDCYLFKISEELVIDATDKGNITRLINHSCMPNCYARIISLDDEESRIVLIAKTNISAGEELTYDYLFDPDELDELKVPCHCNAPNCRKFMN 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0132 1066 SMART PostSET_3 1050 1066 IPR003616 -
Acco07g0132 1066 CDD PWWP_AtATX3-like 269 368 - -
Acco07g0132 1066 Pfam SET domain 935 1040 IPR001214 GO:0005515
Acco07g0132 1066 ProSitePatterns Zinc finger PHD-type signature. 634 679 IPR019786 -
Acco07g0132 1066 Pfam PHD-finger 646 680 - -
Acco07g0132 1066 ProSiteProfiles Zinc finger PHD-type profile. 631 682 IPR019787 -
Acco07g0132 1066 Gene3D SET domain 912 1066 IPR046341 -
Acco07g0132 1066 FunFam Histone-lysine N-methyltransferase 899 1066 - -
Acco07g0132 1066 SUPERFAMILY SET domain 917 1063 IPR046341 -
Acco07g0132 1066 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 683 801 IPR013083 -
Acco07g0132 1066 Pfam PHD-finger 449 502 IPR019787 -
Acco07g0132 1066 ProSiteProfiles Extended PHD (ePHD) domain profile. 685 800 IPR034732 -
Acco07g0132 1066 ProSiteProfiles SET domain profile. 924 1041 IPR001214 GO:0005515
Acco07g0132 1066 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 441 507 IPR013083 -
Acco07g0132 1066 PANTHER PHD FINGER PROTEINS 90 482 - -
Acco07g0132 1066 SUPERFAMILY FYVE/PHD zinc finger 632 696 IPR011011 -
Acco07g0132 1066 Pfam PWWP domain 269 364 IPR000313 -
Acco07g0132 1066 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 14 1066 IPR025780 -
Acco07g0132 1066 SMART PWWP_4 266 335 IPR000313 -
Acco07g0132 1066 SUPERFAMILY Tudor/PWWP/MBT 264 373 - -
Acco07g0132 1066 Gene3D - 255 371 - -
Acco07g0132 1066 CDD PHD_TCF19_like 450 500 - -
Acco07g0132 1066 SMART set_7 924 1047 IPR001214 GO:0005515
Acco07g0132 1066 CDD SET_SETD1-like 913 1062 - -
Acco07g0132 1066 ProSiteProfiles Zinc finger PHD-type profile. 447 503 IPR019787 -
Acco07g0132 1066 SUPERFAMILY FYVE/PHD zinc finger 447 508 IPR011011 -
Acco07g0132 1066 Pfam PHD-zinc-finger like domain 687 799 - -
Acco07g0132 1066 ProSiteProfiles Post-SET domain profile. 1050 1066 IPR003616 -
Acco07g0132 1066 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 628 682 IPR013083 -
Acco07g0132 1066 SMART PHD_3 449 501 IPR001965 -
Acco07g0132 1066 SMART PHD_3 633 680 IPR001965 -
Acco07g0132 1066 SMART PHD_3 744 800 IPR001965 -
Acco07g0132 1066 FunFam Histone-lysine N-methyltransferase 683 802 - -
Acco07g0132 1066 ProSiteProfiles PWWP domain profile. 268 337 IPR000313 -
Acco07g0132 1066 CDD PHD_ATX3_4_5_like 633 679 IPR042011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0132 Acco-ChrAcco07 1370733 1381892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0132 634 787 C2H2 Transcription Factor Family AT3G14740 36.025 1.71e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco07g0132 zf-HC5HC2H_2 1.6e-28 CL0390