Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0127 ATGATGCTCCCATATTGTTGGTACTTGATGTTCAAGCTACTTACTACGATTACATTTCTTTCGAGGTTTAAGGACTGGAGTTCAGAATCATCTTTCAATGTTGAGAGAACAATTTCTTCTGATGATGGATATCCTCAGATAAAAGTTAGACCAAGACCAAGAGATGTGTTTAACAATATTAGAAGAGGAATCCAAAGAAGGTTGGAGAAGATGAAAAACTTGAGAAAACCTGCAAATGTGCATCAAGTAAGCGATGCAACTCCCAAGATATCGGCTTCGAAGACTAAGATTCTTGATCCACAGGGGTCTTTCCTTCAGAAATGGAACAAAATATTTGTGATAGCATGTATACTAGCAGTATCTGTGGATCCTCTGTTCTTTTTCATCCCAGTTATTGATGACAGCAAAAAATGCCTTAGTTTTAACAAACCATTGAAGATTGCTGCCAGTTTTCTTCGTACATTCTTTGACCTTTTCTACATTCTGCATATGGCATTTAAGTTCCGAACGGGTTTTATCGCCCCTTCTTCTCGAGTTTTTGGTAGGGGAGAGCTCATTGATGATCCTCAGGCTATTGCAAAAAAATACTTATCTTCATACTTCATCATTGACATCCTATCAATTATTCCACTTCCACAGGCGTTTACAGTTTGGCTTGGTGCTGCTTATAATCTCTCTCTCTATATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTACCTGTTTTCAGTAGAATCAGAGCTTCGGTGCTGGCACAGAGAATTGAGGAATGCTAATTTGTCTACAGACATAAGCTGTCAACGCCAGATAAATCCAAGTGTCACAACACTTCTCAATCATTCTTGTCCCTTCACGGATCCTGACGAAATTGACGACCCCAAAGTCTTCAATTTTGGAATATATATCGACGCTTTAAAATATCATGTGGTGGATTCAACCACGGATTTCCCTCAAAAGATCTTCTTCTGCTTTTGGTGGGGTCTGCGCAGTGTAAGTTCTCTGGGACAAAATCTGAAGACAAGTACATACGTTGGGGAGATCATCTTTGCTTGCTTCATTGCAATCTTTGGGTTGGGTTTGTTCTCCTTACTCATTGGAAACATGCAGAAATATCTACAACCTGTAACTGTTAGAGTTGAAGAAATGCGAATCAAGAGGAGGGATGCACACCGGTGGATGTCGCACCGTATGCTACCAGAGCCCTTGAGGGAAAGAATCAGACGCTATGAGCATTACAAGTGGCAAGAAAACAGAGGTGTGGATGAGGAAACATTAATCTGCAATCTTCCTCATGATCTCAGAAGAGACATAAAGCGTCACCTTTGCTTGGATTTACTTAAAAAAGTGCCAATGTTTGAGACAATGGATGAGCAGTTGCTGGATGCGCTTTGTGATGGGCTGAAGCCAGTACTTTATACAGAGAAGAGCGCGATTATTCGCGAAGGAGATCCGGTGGATCAAATGCTATTCATTATGCGAGGAAACCTTGCAACTATGACAACCCATGGTGGGAGAACAGGTTTTTTCAACTCTTTCGTTATCAAGGCAGGTGATTTCTGTGGAGAGGAGCTTTTAACATGGGCCTTGGACCCCAACTCGTCCTCAAATCTTCCCATTTCAACCAGAACAGTAGAATCTCTGTCAGAAGTTGAAGCCTTCGCTCTCATGGCTAATGACTTGAAGCATGTTGCTTCCCAATTTCGACGCCTTCACAACAAATACATCCAGGACACTTTCAGGTACTATTCCTTGCAATGGAGGACATGGGCTGCATGTTTCATACAAGTAGCTTGGCGTCGCCACTGTAAAAGGAAGATTGAGAAATCTTTACGTGAAGCGGAAGACAGGCTGCAAGATGCTTTGGCAAAAGAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACCATATATGCAGCAAGGTTTGCTGCCAATGCGTTATGCGGCTTGAAAAAAAATAATGGGGAACGAAAGAGCAACATAATGTCTCAGAGGTTGCTTCCTCTGCTGCCTCAGAAGCCAACTGAGACTGATTTCACTACACAAGCTTCAGGAGTATCTTAG 2058 0.4208 MMLPYCWYLMFKLLTTITFLSRFKDWSSESSFNVERTISSDDGYPQIKVRPRPRDVFNNIRRGIQRRLEKMKNLRKPANVHQVSDATPKISASKTKILDPQGSFLQKWNKIFVIACILAVSVDPLFFFIPVIDDSKKCLSFNKPLKIAASFLRTFFDLFYILHMAFKFRTGFIAPSSRVFGRGELIDDPQAIAKKYLSSYFIIDILSIIPLPQAFTVWLGAAYNLSLYMLASHVVGAFWYLFSVESELRCWHRELRNANLSTDISCQRQINPSVTTLLNHSCPFTDPDEIDDPKVFNFGIYIDALKYHVVDSTTDFPQKIFFCFWWGLRSVSSLGQNLKTSTYVGEIIFACFIAIFGLGLFSLLIGNMQKYLQPVTVRVEEMRIKRRDAHRWMSHRMLPEPLRERIRRYEHYKWQENRGVDEETLICNLPHDLRRDIKRHLCLDLLKKVPMFETMDEQLLDALCDGLKPVLYTEKSAIIREGDPVDQMLFIMRGNLATMTTHGGRTGFFNSFVIKAGDFCGEELLTWALDPNSSSNLPISTRTVESLSEVEAFALMANDLKHVASQFRRLHNKYIQDTFRYYSLQWRTWAACFIQVAWRRHCKRKIEKSLREAEDRLQDALAKEEGSSVSFGATIYAARFAANALCGLKKNNGERKSNIMSQRLLPLLPQKPTETDFTTQASGVS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0127 685 Pfam Ion transport protein 108 215 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco07g0127 685 Pfam Ion transport protein 216 379 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco07g0127 685 SUPERFAMILY cAMP-binding domain-like 380 576 IPR018490 -
Acco07g0127 685 FunFam Cyclic nucleotide-gated ion channel 1 378 442 - -
Acco07g0127 685 CDD CAP_ED 451 582 IPR000595 -
Acco07g0127 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 216 677 - -
Acco07g0127 685 SMART cnmp_10 451 582 IPR000595 -
Acco07g0127 685 Gene3D Helix hairpin bin 378 442 - -
Acco07g0127 685 ProSiteProfiles cAMP/cGMP binding motif profile. 451 535 IPR000595 -
Acco07g0127 685 Gene3D Jelly Rolls 449 569 IPR014710 -
Acco07g0127 685 FunFam Cyclic nucleotide-gated ion channel 1 449 567 - -
Acco07g0127 685 Coils Coil 603 623 - -
Acco07g0127 685 SUPERFAMILY Voltage-gated potassium channels 99 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0127 Acco-ChrAcco07 1346666 1350509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0127 36 680 Ion Channels AT1G01340 56.294 0.0 785