Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0125 ATGGATACCAGGACAGAAAAAGTTGTGAGGTTTAAGGACTGGAGTTCAGAATCGTCTTTCAATGTTGAGGAAGATGGATATTCTCAGAGAAAAGTTAGACCAAGACCAAGAGATGTGTTTAACAATATTAGAAGAGGAATCCAAAGAATGTTTGAGAAGATTAATAACTTGAGAAAACCTGCAAATGTGCATCCAGTAAGCGATGTAACTCCCAAGATATCGGCTTCGAAGACTAAGATTCTTGATCCACAGGGGTCTTTCCTTCAGAAATGGAATAAAATATTTGTGATAGCATGTGTACTAGCAGTATCTGTGGATCCTCTGTTCTTTTACATCCCAGTTATTGATGACAGCAAAAAATGCCTTAGTTTGGACAAACCATTAAAGATTATTGCCAGTGTTCTTCGTACATTCTTTGACCTTTTCTACATTCTGCACATAGCATTTAAGTTTCGAACGGGTTTTATAGCCCCTTCTTCTCGAGTTTTTGGTAGGGGAGAGCTCATTGATGATCCTCAGGCTATTGCAAAACGATACTTATCTTCATACTTCATCATTGACATCCTATCAATTATTCCACTTCCACAGGCGTTTGTTTTGGCTATGAGACCTCCAGTTACACTTCAAGAAAAGGAAAAGGACCGGTTAAAATATGCAATACTTATCCAATATGTCCCCAGATTTCTTCGGATCTATCCATTATTCACAGAAGTAACTAGAACTTCTGGCATACTGACTGAAACAGCTTGGGCTGGTGCTGCTTATAATCTCTTTCTCTATATGCTTGCAAGTCATGTGGTTGGAGCTTTCTGGTACCTGTTTTCAGTAGAATCAGAGCTTCGGTGCTGGAGGAATGCTTATTTGGATACATACATAAGCTGTCAACAGATAAATTCAAGTATCACAAAACGTCTCAATGATTCTTGTCTCTTCAAGGATCCTGACGACATTGACGACCTCAAAGTCTTCAATTTTGGAATATATATCGACGCTTTAAAATATCATGTGGTGGATTCAACGGATTTCCCTCAAAAGATCTTCTTCTGCTTTTGGTGGGGTCTGCGCAATGTAAGTTCTCTGGGACAAAATCTCAAGACAAGTAAATACGTTGGGGAGATCATCTTTGCTTGCTTCATTGCAATCTTTGGGTTGGTTTTGTTCTCATTACTCATTGGAAACATGCAGAAATATCTACAATCTGTAACTGTTAGAGTTGAAGAAATGAGAATCAAGAGGAGGGATGCAGAGCGGTGGATGTCGCACCGTATGCTACCAGAGCCCTTGAGGGAAAGAATCAGACGCTATGAGCATTACAAGTGGCAGGAAAACAGAGGTGTGGATGAGGAAACATTAATCTGCAATCTTCCTAATGATCTCAGAAGAGACATAAAGCGTCACCTTTGTTTGGATTTACTTAAAAAAGTGCCAGTATTTGAGAAAATGGATGAGCAGTTGTTGGATGCGCTTTGTGATGGGCTGAAGCCAGTGCTTTATACAGAGAAGAGCGCGATTATTCGCGAAGGAGATCCGGTGGATCAAATGCTATTTATTATGCGAGGAAACCTTGCAACTATGACAACAAATGGTGGGAGAACAGGTTTTTTCAACTCTTTTGTTATCAAGGCAGGTGATTTCTGTGGAGAGGAGCTATTAACATGGGCCTTGGACCCCAACTCGTCCTCAAATCTTCCCATTTCAACCAGAACAGTAGAATCTCTGTCAGCAGTTGAAGCCTTCGCTCTCATGGCTAATGACTTGAAGCATGTTGCTTCCCAATTTCGACGCCTTCACAACAAATACATCCAGGACACTTTCAGGTACTATTCCTTGCAATGGAGGACATGGGCTGCATGTTTCATACAAGTTGCTTGGCGTCGCCATTGTAAAAGGAAGATTGAGAAATCTTTACGTGAAGCGGAATACAGGCTGCAAGATGCTTTGGCAAAAGAGGAAGGTTCTTCTGTAAGTTTTCGTGCCACCATATATGCAGCAAGGTTTGCTGCCAATGCGTTACGCGGCCTGAGAAAAAATAACGGGGAACGAAAGAACAACAGAATATCTCAGAGATTGCTTCCTCTGCTGCCTCAGAAGCCAACTGAGACTGATTTCACTACACAAGTTTTAGGAGTATCTTAG 2136 0.4106 MDTRTEKVVRFKDWSSESSFNVEEDGYSQRKVRPRPRDVFNNIRRGIQRMFEKINNLRKPANVHPVSDVTPKISASKTKILDPQGSFLQKWNKIFVIACVLAVSVDPLFFYIPVIDDSKKCLSLDKPLKIIASVLRTFFDLFYILHIAFKFRTGFIAPSSRVFGRGELIDDPQAIAKRYLSSYFIIDILSIIPLPQAFVLAMRPPVTLQEKEKDRLKYAILIQYVPRFLRIYPLFTEVTRTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSVESELRCWRNAYLDTYISCQQINSSITKRLNDSCLFKDPDDIDDLKVFNFGIYIDALKYHVVDSTDFPQKIFFCFWWGLRNVSSLGQNLKTSKYVGEIIFACFIAIFGLVLFSLLIGNMQKYLQSVTVRVEEMRIKRRDAERWMSHRMLPEPLRERIRRYEHYKWQENRGVDEETLICNLPNDLRRDIKRHLCLDLLKKVPVFEKMDEQLLDALCDGLKPVLYTEKSAIIREGDPVDQMLFIMRGNLATMTTNGGRTGFFNSFVIKAGDFCGEELLTWALDPNSSSNLPISTRTVESLSAVEAFALMANDLKHVASQFRRLHNKYIQDTFRYYSLQWRTWAACFIQVAWRRHCKRKIEKSLREAEYRLQDALAKEEGSSVSFRATIYAARFAANALRGLRKNNGERKNNRISQRLLPLLPQKPTETDFTTQVLGVS 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0125 711 FunFam Cyclic nucleotide-gated ion channel 1 404 468 - -
Acco07g0125 711 Coils Coil 629 649 - -
Acco07g0125 711 Gene3D Helix hairpin bin 404 468 - -
Acco07g0125 711 SUPERFAMILY Voltage-gated potassium channels 82 399 - -
Acco07g0125 711 SUPERFAMILY cAMP-binding domain-like 406 602 IPR018490 -
Acco07g0125 711 Gene3D - 92 403 - -
Acco07g0125 711 CDD CAP_ED 477 608 IPR000595 -
Acco07g0125 711 Gene3D Jelly Rolls 475 595 IPR014710 -
Acco07g0125 711 Pfam Ion transport protein 91 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco07g0125 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 69 703 - -
Acco07g0125 711 ProSiteProfiles cAMP/cGMP binding motif profile. 477 561 IPR000595 -
Acco07g0125 711 SMART cnmp_10 477 608 IPR000595 -
Acco07g0125 711 FunFam Cyclic nucleotide-gated ion channel 1 475 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0125 Acco-ChrAcco07 1329370 1335007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0125 1 705 Ion Channels AT5G53130 62.778 0.0 893