Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0112 ATGGCCAAACGCCATAGAAAGACCAGTAGCTCTTACTCTGAAGAGGTGAGCAGCATTGAATGGGAGTTCATCAACATGACAGAGCAAGAAGAAGATCTAATTCACAGAATGCACAGACTTGTTGGAGACAGGTGGAACCTGATAGCAGGGAGGATTCCAGGACGGAAAGCTGAGGAGATTGAGAGGTTTTGGATTATGACTTACGGACATGTCTTTGCCTCCAAAAGAGAACATCTTCTCAATACCCCATCCTCTTCCCACTAA 264 0.4545 MAKRHRKTSSSYSEEVSSIEWEFINMTEQEEDLIHRMHRLVGDRWNLIAGRIPGRKAEEIERFWIMTYGHVFASKREHLLNTPSSSH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0112 87 SUPERFAMILY Homeodomain-like 27 66 IPR009057 -
Acco07g0112 87 SMART sant 22 70 IPR001005 -
Acco07g0112 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 69 - -
Acco07g0112 87 FunFam MYB-like transcription factor 25 67 - -
Acco07g0112 87 CDD SANT 25 64 IPR001005 -
Acco07g0112 87 Gene3D - 26 67 - -
Acco07g0112 87 Pfam Myb-like DNA-binding domain 26 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0112 Acco-ChrAcco07 1194664 1196197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0112 25 64 MYB Transcription Factor Family AT5G14750 57.500 1.26e-13 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco07g0112 Myb_DNA-binding 3.4e-07 CL0123