Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0111 ATGGAAGAGGCCAAGAAGTGGGGACAGTTCAGTCTCATCAGTGAGCTAATCCAAGGGAAGGAATTTGCTCAGCAACTCTGTTCCCATCTTTCTTCTTCATCTCTTGAAGAGAAAGAGCTCTTACTTGAAAAAATTCTTTCATCCTATGAGAAGGCTTTGTCCTTGCTTAATGAGGGAGATACTGACGTCATCAATGGGAAGATGGTGATGGATTCTCTCTGTTCGTTTATTGGTGGGAGCCCCAAAAGTGAGGTGCTGGACCAAGATTTTAACCACAAGGATTCCATCAAGAAAAGAAAGACGATGCCTAGATGGACTAAGCAAGTTAAGGATTGCTCAGGGACAGGGCTTGAAGGGTCTCAGGATGATGGTTATAGCTGGAGAAAGTATGGACAGAAGGATATTCTAGGATCCAAGTTTCCAAGAGGATATTATAGATGTACTCACAGAAACGTACAAGGTTGTCTGGCTACAAAGCAAGTTCAAAGATCTGATGAAGACCCAACCATTCTTGAGATAACCTACAGAGGAAGACACACTTGTACACAAGCATCTCATGTGAAAAAGACATTACCATTGAAAAGAAAGGTGGGCTTGATGATGGAAAATAATCCAATGCAGAAACATCAAGATGATGATCAATCACTATTGGAACTAAACCCAGAAGTGTTTTTAAATGTTGGAGCAGAGGTTGAAGTTAAAACAGAGGAATTTGATACAAGGGAGAAAATTTTCCCACCCTTTTGCTTCCCTTATGCGTCAATAGGATCTGAGAATGAAGACAACTTTTTATACTCTGAGCCCTTGATAGAAAACCACTTCATGGGAAGTTTGTCTTCTCCTAAGTTTATCTCACCCGCAACCCCGGAGTCTAACATTTTCTGTCTGAATGTGCAGACTTCAGAATCTGATGTCACTGACACAGTAATTTCAGCTCCAACTTCAGTTACCAATTCCCCAATAGCTGATTTGGATCTCTTACTAGATTTTGACTCCTGTTTCCCTCCCAACGAGCCAGAACTGTTTTCCTCATAG 1035 0.4135 MEEAKKWGQFSLISELIQGKEFAQQLCSHLSSSSLEEKELLLEKILSSYEKALSLLNEGDTDVINGKMVMDSLCSFIGGSPKSEVLDQDFNHKDSIKKRKTMPRWTKQVKDCSGTGLEGSQDDGYSWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTILEITYRGRHTCTQASHVKKTLPLKRKVGLMMENNPMQKHQDDDQSLLELNPEVFLNVGAEVEVKTEEFDTREKIFPPFCFPYASIGSENEDNFLYSEPLIENHFMGSLSSPKFISPATPESNIFCLNVQTSESDVTDTVISAPTSVTNSPIADLDLLLDFDSCFPPNEPELFSS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0111 344 FunFam WRKY transcription factor 53 107 184 - -
Acco07g0111 344 Gene3D WRKY domain 106 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco07g0111 344 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 254 IPR044810 GO:0003700
Acco07g0111 344 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco07g0111 344 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco07g0111 344 Pfam WRKY DNA -binding domain 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco07g0111 344 SUPERFAMILY WRKY DNA-binding domain 121 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0111 Acco-ChrAcco07 1156273 1158265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0111 16 213 WRKY Transcription Factor Family AT5G24110 48.000 3.09e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco07g0111 WRKY 1.9e-27 CL0274