Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0070 ATGCTGAATAATGATGTATGGACTACTTGTAAGGGGAAGGAACAAAGGTTTTGTGATAAGTTGTTGGGTGCAGGTGTTTCATCTGTATATAACGGGACATACAATGCTTGGGATTTTGTTTGGCTTAGTTACCCACTCTCAACGAAATCCCTTGCCTTGGCGCTTGAAAATCCAATCCGTTGTTACTCCGAGAGTGAGGAACGAGCAAACACTATTTTCATGGCTAGTCCATCGATTCTCCAGTCCTCAACATCGTCGTTCCTGGGTCAATTTCGAGTCTTTCCGGCTCCAGTGTCCTCCGGAATCCTCTACAGAAATGGGAATGGAGGTGCGGTTGCGCCGGTGAAGGCCACTGCGGCTGGGTCCGGAGCTTTATTGGTGGAGAAGTCTGAGGCAGAGAAGTCCCACCGGCTCAAAATAAATTACACTGAGAAAATTGTTCCCTTGCTCATGGAAGAATTCAACTACAGCAATATACACGAGGTCCCTAAAATTGAGAAGGTCGTGGTTAATTGTGGTATCGGAGATGCTGCACAGAATGCAAAGGGTTTGGAGGCTGCAATGAATGACCTAGCACGCATCACAGGGCAGAGGCCTGTTAAGACTCGAGCGAGGGCTTCAGTTGCCACCTTCAAGATCAGGGAAGGCCAACCCCTTGGAATTGCTGTGACGCTCAGAGGAAAACTGATGTTCTCATTCCTAGACCGACTCATCAACTTGGGACTTCCTAGGACAAGGGATTTCCAAGGTGTTAACCCCAACAGCTTTGATGGACACGGGAATTACAGCATTGGCATCCGGGACCAGAGTGTGTTCCCAGAAATCAGGGCTGATATCGTCGGTAATCCCAGAGGAATGGACGTGTGTATAACGACAACAGCAAAAACAGATCAAGAAGCAAGCAGATTACTGGTTCTTATGGGCATGCCATTCAGATCGGGAGGTGGTCCTGCTACAACAATGCGCAAAAAGAAGCTCAAGTCTCACCATTTTGACTCCAAATCAAAGGGCAGAGGAAAGAGGTGA 1026 0.4786 MLNNDVWTTCKGKEQRFCDKLLGAGVSSVYNGTYNAWDFVWLSYPLSTKSLALALENPIRCYSESEERANTIFMASPSILQSSTSSFLGQFRVFPAPVSSGILYRNGNGGAVAPVKATAAGSGALLVEKSEAEKSHRLKINYTEKIVPLLMEEFNYSNIHEVPKIEKVVVNCGIGDAAQNAKGLEAAMNDLARITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKLMFSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGIRDQSVFPEIRADIVGNPRGMDVCITTTAKTDQEASRLLVLMGMPFRSGGGPATTMRKKKLKSHHFDSKSKGRGKR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0070 341 MobiDBLite consensus disorder prediction 314 341 - -
Acco07g0070 341 SUPERFAMILY RL5-like 137 312 IPR022803 -
Acco07g0070 341 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 139 316 IPR002132 GO:0003735|GO:0005840|GO:0006412
Acco07g0070 341 MobiDBLite consensus disorder prediction 322 341 - -
Acco07g0070 341 ProSitePatterns Ribosomal protein L5 signature. 191 207 IPR020929 GO:0003735|GO:0005840|GO:0006412
Acco07g0070 341 FunFam 50S ribosomal protein L5 133 313 - -
Acco07g0070 341 Hamap 50S ribosomal protein L5 [rplE]. 135 313 IPR020930 GO:0003735|GO:0005840|GO:0006412
Acco07g0070 341 Gene3D - 129 313 IPR022803 -
Acco07g0070 341 Pfam ribosomal L5P family C-terminus 218 311 IPR031309 -
Acco07g0070 341 Pfam Ribosomal protein L5 158 214 IPR031310 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0070 150 269 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.500 1.78e-06 46.2