Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0066 ATGTTTGTAATATTGAGATCTAGCGTTCTACTCACAAGTTTTCACAGAATGTTTAAGAGCGCCGACTTCTTCTTGTTTTACTGCCGAACTTATATCCTTGAGCATAGACTCAAGACCATACATGATTGCAGTGAACTGGTGCTGAACGTATTATTTAAGCATATGGCCAAGTACAATGAAAGATCTATACTCTCTGAATCAAGTCAAGCGGTTATTTATAATTTGTGCGTGGAGTTAATTATTCAACCAAATTACTATATTATGAACCTTACAATATATCCTGATCGCATTATTCATGCAACCATTCCTGGGAATTCATTGACTCAAGCAGCCTATTCCAAAGGAGAGTATGTACAGTCCTCTGAAATTTTTTCCAAGAATCAATGGAGAACTTTGTCTGCTGAAAACAAAAACTTCTCTAAAACCAAACCCAGTGCTTCTTTCTCTACTAAATTTCCCATTTTCATTTGTTCCCATAACTCTCTTCCTTCTGCTTCAAAGACCCACTTGTTAAACCATCAATCATATTCACCATATTTGAATAACACTGATTTTCCATCTGATTGGGCTAATCAAATCAAAGATGCTTGGAAGAATGCAGTAGAACAGATTGAAGAAGCTTCTGGCGAGTTTAGTCTCTATGTTCGAAAGGTTTTCGACTCAAATCCATATCTGTGTAACGTGGTTATTCCAGTAGGCGGTACATTAACGGCAGCTCTAACAGCATGGATTGTGATGCCTCGCATTTTGAGGAAGCTTCATAAATATTCAATGCAAAGTCCTGCTGCAATATTTCTTGAGGGAAGCATTCCTGGGGAGCTAGTTCCTTATGAGAAAAGTTTTTGGGGTTCTTTGGAGGATCCTGTGCGATATTTGGTTACCTTCATGGCATTCTCACAAAGTTGTGTAATGGTGGCTCCTACAACTTTAGCCTCACATCTTGCACAGGCTTGGAGGGGTGCGGTGATACTTTCATTTGTGTGGTTTTTGCATCAATGGAAAACAAATACTTTAAGGCACATTTTGTCTGGTCAAAGTTTACTTGGGCTTGGTCAAGATAAATTGGTTGCTCTAGACAAAGTTTCATCTGTTGGTCTGTTTGTGATTGGTATAATGGCTTTGTCAGAGGCTTGTGGTGTCGCTGTACAATCTATTGTAACTGTTGGTGGTATAGGAGGAGTTGCCACTGCTTTTGCAACCAAGGACATTCTTGGCAATGTATTCAGTGGCCTGTCTATGCAAATTTCAGAGCCCTTTACAGTTGGAGATAGAATCAAAGCTGGCTCAGTAGAGGGTGAAGTGGTGGAAATGGGACTTACAACTACATCATTGCTGAATTCTGATAAGTTTCCTGTTGTAGTGCCAAACTCACTTTTTTCCAGCCAAGTGATAGTGAACAAGTCTCGTGCTGAATATTGCGCCATCACATCTAAAATTCCATTGGCGATTGGTGATTTGAGTAGAATTCCGAGGATATCTGATGATATAAAGAGCATGCTTAAAACAAAGGAAATGGTTTTCTTAGGGAAAGAGGCTCCTTACTGTTATCTGTCACGCATTGAAAATTCATTTGCACAATTGACTATTGGATACAACATCAAGTACATGAGCGAAGATGAGATGTATAGTGCAGAACAAGATATACTGCTGGAAGTAGTTGACATTATCAAGAAGCATGGTGGTGAACTTGGCCGTTCTTGGCGTCCCATGTCTTATCACTCCGAGTAA 1728 0.3953 MFVILRSSVLLTSFHRMFKSADFFLFYCRTYILEHRLKTIHDCSELVLNVLFKHMAKYNERSILSESSQAVIYNLCVELIIQPNYYIMNLTIYPDRIIHATIPGNSLTQAAYSKGEYVQSSEIFSKNQWRTLSAENKNFSKTKPSASFSTKFPIFICSHNSLPSASKTHLLNHQSYSPYLNNTDFPSDWANQIKDAWKNAVEQIEEASGEFSLYVRKVFDSNPYLCNVVIPVGGTLTAALTAWIVMPRILRKLHKYSMQSPAAIFLEGSIPGELVPYEKSFWGSLEDPVRYLVTFMAFSQSCVMVAPTTLASHLAQAWRGAVILSFVWFLHQWKTNTLRHILSGQSLLGLGQDKLVALDKVSSVGLFVIGIMALSEACGVAVQSIVTVGGIGGVATAFATKDILGNVFSGLSMQISEPFTVGDRIKAGSVEGEVVEMGLTTTSLLNSDKFPVVVPNSLFSSQVIVNKSRAEYCAITSKIPLAIGDLSRIPRISDDIKSMLKTKEMVFLGKEAPYCYLSRIENSFAQLTIGYNIKYMSEDEMYSAEQDILLEVVDIIKKHGGELGRSWRPMSYHSE 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0066 575 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 189 571 - -
Acco07g0066 575 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 316 401 IPR011014 GO:0016020
Acco07g0066 575 SUPERFAMILY Sm-like ribonucleoproteins 402 467 IPR010920 -
Acco07g0066 575 Gene3D - 418 466 IPR023408 -
Acco07g0066 575 Gene3D - 316 416 - -
Acco07g0066 575 Pfam Mechanosensitive ion channel 360 560 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0066 Acco-ChrAcco07 650314 653958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0066 189 567 Mechanosensitive Ion Channel Family AT4G00290 61.240 1.84e-169 489