Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0065 ATGTCTCGGGCCATAGTGACGTTTTCCTGTCTGAAACGTCTCCAGAAATTTTCAGCCAAGTTTTGTTTAAACTTGAAGTCAACTCAACCAATAAAGCATCATATTATGAACCCAACAAGGTGTGAGGATTTTGTTCATGTAAAGCTTCCCACTAATTCACCGAGTCAATCTTATTTCAAAGGAGAGTTACAGTTACCTGTAATATTTGCCAAGAAGCAGTTCAGAACTAAAACTTCAGAAAACAGCAACCTCTTGAATACCAAACCCAGTGCATCATTATCTCCTAACATTTCCAGATTTTGCCTCCATCAAAAGTCTCTTCCTTTTGCTTCAATGACCCTAATGTTGAAACATCGATCATATTCATCAGATCTGAGTGATTCCACAGATATCAGTGATTGGGCTGCTGATCTGTCAGATCCGACTCCATGTGTTCAACAGTTGCTTGACTCAAACCCATTCCTGGTTATCACAGTTGGTTCCACTCTCATAGCTTGGATTGTGATTCCTCTGATTCTGAGGAAATTTCACCAGTATTCAATGCAAAGTTCTGCAGCAACAACACTTCCTTATGAGAAAACCTTTTGGGTTGCTTTGGAGGATCCAGTGCGATATTTGGTTACCTTTGTGGCATTCTCATACATCTGTGTGATGATAAATCCAACAAGTGAAGCCTCACTGCCCCTTGCAGAGGCTAGGAAGGAGGCAGTGATCGTATTTTTTACATGGTTTTTGCATCGATGGAAAACAAACATCTTGGGACAAATTTCTCCCCATCAAAGTTCCCCTGGGCAAGATCAACTTAAATTGCTTAATCTACAAAATGTCTCATCTGCTTCTATATTTGGGATTGGTGGTACCATGACTTTGACCCAGTTTGGTGATGTCTCTGTTGAATCTGTTGTAATTGTTGGCGGAATGGGAGGAGCTGCCACTGCTTTTGCGGCCAGAGACGTGCTTGCCAATGTGTTCACCGGACTGTTTATGCAGTTGTCGGAGCCTTTTACAGTTGGCGACACAATTAAAGCAGGGTGGGTAGAAGGACAGGTGATAGAAATGGGAGTGACAGAAACATCATTGGTGAATGGTGAGAAAATGGAAGTGGTAGTGCCCAACTCATATTTTGGCAAGCAGGTAATAGTGATAAAGTGTCGAGCAGAATGGCGGGGCACGATATGTAAAATCCCAGTGAGGATAGAGGCCATTGATAGAATTGGCAAGATATCACAAGAGATGAAGAGCATGCTCGCAGCAAATGGTAATGTGTTGTTGGAAAAAAGAGCCCCTCACTGTTACCTGTCGCGCATTGAAACTTCACACGCAGAAGTGACTCTTGCCTACAACCTCAAACTCATGGGGAAAGAAGCCATGTGTTTGGCAAAACAAGGTATAATGAAGGAGGCAATGGAGATTCTCAACAGGCATAATGCTGCTTATCTCTCCTCTGATTCTGACTCAGACTCTGACTGA 1470 0.4265 MSRAIVTFSCLKRLQKFSAKFCLNLKSTQPIKHHIMNPTRCEDFVHVKLPTNSPSQSYFKGELQLPVIFAKKQFRTKTSENSNLLNTKPSASLSPNISRFCLHQKSLPFASMTLMLKHRSYSSDLSDSTDISDWAADLSDPTPCVQQLLDSNPFLVITVGSTLIAWIVIPLILRKFHQYSMQSSAATTLPYEKTFWVALEDPVRYLVTFVAFSYICVMINPTSEASLPLAEARKEAVIVFFTWFLHRWKTNILGQISPHQSSPGQDQLKLLNLQNVSSASIFGIGGTMTLTQFGDVSVESVVIVGGMGGAATAFAARDVLANVFTGLFMQLSEPFTVGDTIKAGWVEGQVIEMGVTETSLVNGEKMEVVVPNSYFGKQVIVIKCRAEWRGTICKIPVRIEAIDRIGKISQEMKSMLAANGNVLLEKRAPHCYLSRIETSHAEVTLAYNLKLMGKEAMCLAKQGIMKEAMEILNRHNAAYLSSDSDSDSD 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0065 489 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 147 479 - -
Acco07g0065 489 SUPERFAMILY Sm-like ribonucleoproteins 318 380 IPR010920 -
Acco07g0065 489 Gene3D - 334 381 IPR023408 -
Acco07g0065 489 Gene3D - 234 332 - -
Acco07g0065 489 Pfam Mechanosensitive ion channel 276 477 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0065 Acco-ChrAcco07 631247 634126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0065 129 478 Mechanosensitive Ion Channel Family AT4G00290 50.546 7.62e-120 358