Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0064 ATGACCGGAGCAAGGTTTTCCTATCTGAAATGTCTCCAGAAATATTCAGCTAAGGGTGCCTTTAACGTGGAATTGGTTCAGCCAAATCAACGTATTATGAACCTTGCAAGATCTGTGGATTGCGTTCATTTAAGATTTCTGAGTACTACATTCAGTCGAGCTTATTCCAAAAGAGAGTTACAGTTACCTGAAATTTTTGCCAAGAACCGGTTTAGAACGATGACTTCAGGAAACAGCAACCTCTTCACCAGACCCGGGGCTTCGTTTTCTCCCAATGTTTCTAGTTTTTTCTTCCATAACGCTTTCCCTTTTGCTTCGCCTTCAATGACCCTCTTGTTGAATCATCGACCATATTCATCAACTCTGGGTGGCAATGGAAGTAGAGATAGGAGCACTGATTTTCCATCTAATTCTGGGGCAAGTGACATGAATGCCAGCATTGATTCTTTTGGTGCGAGTGATTGGGCTGATAAAATCAAAGATGCTTGGCAGAGTGCAGTAGAGACAGTAACATATTATGCACAAAAGGTTAAAGAGGCCTCTGATGAGCTGACTCCACATGCTCAACAGTTGCTCGACTCCCATCCATTCCTTAAAGATGTGATTATTCCAGTTGGTGGTACGTTTACTGCCACACTAATAGCCTGGATTGTGATGCCTCGGATCTTAAGAAAATTTCACAAATATGCAATGCAACGTCCTGCTGCAATATTTCCAGGAAGCACATCTGAGACGCAAGTTCCTTATGAGAAAAGTATTTGGGGTTCTTTGGAGGATCCAGTGCGATATTTGGTTACCTTCATGGCATTCTCACAGATTGGTGTACTGGTAGCTCCAACAACTGTGGCCTCACAATACCTTACACAGGCTTGGAGGGGTGCAGTGATCCTTTCATTTGTGTGGTTTTTGTATCGATGGAAAACCAATGTCTTGGGACGTATTTTGTCAGGTCAAAATTTACTCAAGCTTGATCGAGATAAATTGCTCGCTCTAGAAAAAATATCATCTGTGGGTCTATTTGTGATTGGTATAATGGCTTTAGCTGAGGCTTGTGGAGTGGCTATGCAATCTATTATAACTGTTGGTGGTATAGGAGGAGTTGCCACTGCTTTTGCTGCTAGAGACATACTTGGAAATGTATTCAGTGGGTTATCAATGCAATTTTCAAAGCCCTTTACTGTTGGAGATACAATAAAAGCTGGCTCGGTAGAGGGTCAGGTGGTGGAAATGGGACTTACTACTACATCATTGCTGAATGCTGAGAAGTTCCCAGTTATAGTGCCAAACTCACTTTTCTCTAGCCAGGTAATAGTGAATAAGTCTCGTGCTGAATGCCGTGCCATCGAATCTAAAATTCCTTTGCGAATTGAGGATATGAGTAAAATTCCCAAGATATCAGATGACATCAAGACAATGCTAAGAACAGATCCTGTGGTTTTCTTAGGGAAAGAGGTTCCTTACTGTTACATGTCGCGAATTGAAAGTTCATATGCAGAACTGACTATTGGATACAACCTCAAACACATGCGTAAAGATGAGATGTACTCTGCAGAACAAGATATTCTGCTACAGGCGGCCCAGATTATTAAGAGGCATGATGCTGAACTTGGCAATACCTGGCAAAACATACCTTAA 1635 0.419 MTGARFSYLKCLQKYSAKGAFNVELVQPNQRIMNLARSVDCVHLRFLSTTFSRAYSKRELQLPEIFAKNRFRTMTSGNSNLFTRPGASFSPNVSSFFFHNAFPFASPSMTLLLNHRPYSSTLGGNGSRDRSTDFPSNSGASDMNASIDSFGASDWADKIKDAWQSAVETVTYYAQKVKEASDELTPHAQQLLDSHPFLKDVIIPVGGTFTATLIAWIVMPRILRKFHKYAMQRPAAIFPGSTSETQVPYEKSIWGSLEDPVRYLVTFMAFSQIGVLVAPTTVASQYLTQAWRGAVILSFVWFLYRWKTNVLGRILSGQNLLKLDRDKLLALEKISSVGLFVIGIMALAEACGVAMQSIITVGGIGGVATAFAARDILGNVFSGLSMQFSKPFTVGDTIKAGSVEGQVVEMGLTTTSLLNAEKFPVIVPNSLFSSQVIVNKSRAECRAIESKIPLRIEDMSKIPKISDDIKTMLRTDPVVFLGKEVPYCYMSRIESSYAELTIGYNLKHMRKDEMYSAEQDILLQAAQIIKRHDAELGNTWQNIP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0064 544 Pfam Mechanosensitive ion channel 333 535 IPR006685 GO:0016020|GO:0055085
Acco07g0064 544 Gene3D - 391 439 IPR023408 -
Acco07g0064 544 SUPERFAMILY Sm-like ribonucleoproteins 375 440 IPR010920 -
Acco07g0064 544 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 287 374 IPR011014 GO:0016020
Acco07g0064 544 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 155 539 - -
Acco07g0064 544 Gene3D - 286 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0064 Acco-ChrAcco07 624677 628179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0064 72 542 Mechanosensitive Ion Channel Family AT4G00290 59.958 0.0 570