LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco07g0057	ATGGCAAGGTGGTCGATACCCGAGGACGGACTTATTTTAGATTTCACTGAAATCCCTGAAAAGTTTAAAAATGCTAGATATATTGATCTCGAGGTATATTCAGAAGCTCCTGGGGCCAGAGACCAAGATTACAGAGTCGTTGAAGTTGAACCTAATGAGTTCCAATGTTCATTTGATGAATTTCTTATTGAGTTTTTGAAAGAGGTCCAGGGAAACGATTGTTTTCGACCTATTCCACCAATGCTTGGCAGTGAGCAACCAGTGGATTTGAAAACCATATTCTTGATAGTGATAGGGACAGGAGGGTATGATGCGGTCTCCAAAAACAATTTATGGAATTTGGTGGCCGAAAAATCTGGCTTAGGAATGAACATTGGTTCATCAGCAAAGTTGATCTATTTCAAGTATTTATGCACCTTAGAAACATGGCTCTTAAAAGTTTCTGAGGGTATGGTACTTAGTCAGAGTTTGATTGATGATGGAATCAACTTTGGTAGTCAACTGATAGAACTCCAAGCCAAAATAAAAAGGCTACTGTCAGATTATATGGCTCAACATGTGGGAAATATAATATCTAGAATTTATGATTTCAAGAATGAATATGACTTTCTGGATGGGAGTAGATTGTTTGACGAGTACTCAATGATAGTGAAGGGTTGTATTGGTGGAAGGAAGATCATTGTGAAGAAACTAGTAAGTGCGTTAGATGATGAAAAGGAGTCATCTAATGACAATGAAATGAACAATGTGGCTAGTTCATCTAATGAAGTCAATGAATCTGACAATGACAATGATGATGTCTTGATATTAGACCCATCTAGTGTTAATAAGGAGAACTTTGGGCGTAAGAGGAAGAGAAAGTCTGTGCAAGAAATGTTATGTTGGGTAACTAGCATTGCAAAGAATCCATGTGATCCTTTACCCTGTTCATCAATACTTGAAAGATCAAAGTGGAGTTCTCAAAGTGCTGAGGAGATGAAGAAGCAGGTTTTGTTGTTTCGAGAGGCTGTCTATATGAAAAGAAATGGTGAATCAAGCAAACATGATGATGGGCAGGGTATGAAGATGCATCTAGGTGGGAAAACTTGCTTTCTTAAGGAAGGGATGAAGTGTGATGAGTGTAACAGGACGCTTCCAATTCCAAATGAAAATCTCTTATCTGTTTTACCACCTGACTCGACAAATATTCCCATACCAACTGAAGCTGATTCAAATATTAATACTACTACTCAAAGTCCACACACTGAAGTTCGTGTAGAGAAAATTGCACATTTAGCCAAATGTACCACATTAGCCATCCCTAAAGGGCCTGCTCATCAAGCTTCAGTACCAGAATGGACTGGTGTGACTCTTGAAAGTGATCCTAAATGGTTGGGGACCCAAATATGGCCATTGAAAAGTGCAAGTCAAAGACTTGTCGCTGAAGAAAGGGATCTTATTGGAAAGGGAAGAGATGACCTTTGCAGCTGCCAAGTAGCAGGATCAGTGGAGTGTGTCAAATCTCACATTGCTGAAAATAGAGCTGAAGTTAAATTGGAATTGGATGAGGCTTTTTATCAGTTGAATTTCGACAAGGCAGGGGAAGATGTTAGCCATTATTGGACTTATGAAGAGGAGAAGAAGTTCAAGGATGTGCTGAAATCAAATGCCTCTTCACTAAAGAAACGTCTTTGGGATCGTGTTTTCAGTTCATTTCCTAAGAGAAGCAGACAAGATTTGGTCAACTACTATTTCAATGTCTTTGTTTTAAGACGTCGAAGATTCCAGAATCGACATTCTCCGGATACCGTTGACAGTGATGATGATCAATCGGAGTCGGAGCCACTGATCAAACCCAAAACAACTGGCTCATCAAAAAAAGTACGTCTTATCTTCCCAATTGAAATATTACTCTAG	1896	0.3914	MARWSIPEDGLILDFTEIPEKFKNARYIDLEVYSEAPGARDQDYRVVEVEPNEFQCSFDEFLIEFLKEVQGNDCFRPIPPMLGSEQPVDLKTIFLIVIGTGGYDAVSKNNLWNLVAEKSGLGMNIGSSAKLIYFKYLCTLETWLLKVSEGMVLSQSLIDDGINFGSQLIELQAKIKRLLSDYMAQHVGNIISRIYDFKNEYDFLDGSRLFDEYSMIVKGCIGGRKIIVKKLVSALDDEKESSNDNEMNNVASSSNEVNESDNDNDDVLILDPSSVNKENFGRKRKRKSVQEMLCWVTSIAKNPCDPLPCSSILERSKWSSQSAEEMKKQVLLFREAVYMKRNGESSKHDDGQGMKMHLGGKTCFLKEGMKCDECNRTLPIPNENLLSVLPPDSTNIPIPTEADSNINTTTQSPHTEVRVEKIAHLAKCTTLAIPKGPAHQASVPEWTGVTLESDPKWLGTQIWPLKSASQRLVAEERDLIGKGRDDLCSCQVAGSVECVKSHIAENRAEVKLELDEAFYQLNFDKAGEDVSHYWTYEEEKKFKDVLKSNASSLKKRLWDRVFSSFPKRSRQDLVNYYFNVFVLRRRRFQNRHSPDTVDSDDDQSESEPLIKPKTTGSSKKVRLIFPIEILL	631

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco07g0057	631	CDD	SANT	534	581	IPR001005	-
	Acco07g0057	631	MobiDBLite	consensus disorder prediction	592	608	-	-
	Acco07g0057	631	PANTHER	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2	52	608	-	-
	Acco07g0057	631	Gene3D	-	39	152	IPR036431	GO:0003677
	Acco07g0057	631	SMART	ARID_2	49	141	-	-
	Acco07g0057	631	ProSiteProfiles	ARID domain profile.	52	145	IPR001606	GO:0003677
	Acco07g0057	631	CDD	ARID	58	137	-	-
	Acco07g0057	631	SMART	bright_3	53	146	IPR001606	GO:0003677
	Acco07g0057	631	MobiDBLite	consensus disorder prediction	592	616	-	-
	Acco07g0057	631	MobiDBLite	consensus disorder prediction	238	267	-	-
	Acco07g0057	631	Pfam	ARID/BRIGHT DNA binding domain	64	140	IPR001606	GO:0003677
	Acco07g0057	631	SUPERFAMILY	ARID-like	53	154	IPR036431	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco07g0057	Acco-ChrAcco07	564232	566339	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	ARID	Acco07g0057		ARID	2.7e-07	CL0123