Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0027 ATGGATCGAGGGGATCATATGGCGTTATCTGGGTCTGCGTCATACTATATGCAGAGAGGGCTAGCCAGTGCTGGAGCACAGCCTGAGCTACATGGTTCCCCTGGCCCTGGTATTCGTTCCTTGTCGAATCCCAATCTGCCATTTCAACCTGGCATTGGAGGTGGTGGCGCCATTGGATCCACATTATCTGTGGAATCTTCAGCAATTTCACCTCATGGTGTCAATGTGGGTGCTCCTCCAGGTGCACCGCCGGGAGAACCTGTCAAAAGGAGGAGAGGAAGGCCTAGGAAATACGGTCCAGATGGAAGTGTATCATTGGCCTTGACTCCATCATCGTCTGGCCATCCCAGTGGAGCATTGACACAAAGCCAGAAGCGAGGTAGAGGCCGCCCTCCCGGATCTGGCAAGAAGCAACAGTTGGCCTCTCTTGGTGAATTGATGTCTAGTTCAGCAGGGATGGGATTTACTCCTCACATCATCACCATTGCAGTTGGAGAAGACATTGCAACAAAAATAATGGCATTTTCTCAGCAAGGACCCAGAGCCGTATGCATTTTGTCAGCAAATGGTGCTGTCTCTAATGTGTCGCTTCGACAGTCTTCAAGTTCGGGTGGCACTGTCACATACGAGGGGCGTTTTGAGATATTGTGCCTATCAGGCTCTTATTTGCTCACTGAAAGTGGTGGCTCTCGCAATCGAACTGGTGGTCTTAGTGTTTCGCTGGCTAGTCCTGATGGCCGTGTCATTGGTGGTGGGGTTGGTGGATTGCTCATTGCAGCAAGTCCTGTTCAGGTGATAGTTGGGAGCTTCATATGGGGAGGATCAAAGACAAAGAGCAAGAAAAAGGAGGCTGCAGATGAAGCAGAAGTTGCCATGGAATCAGATCATCAGCACCAGCATCATCATCATCATCAACAACATCAAGCGGTTCATAATCCCCCAGCATTGAACAGCATGTCACCGAATCAAAATCTCACCCAAGCTTCATCTATGAGTTCATGGCCAGCTGCTTCTCGTCAATTGGACATGCGTAATTCCCATGTTGACATTGATTTAATGCGTGGGTGA 1068 0.4963 MDRGDHMALSGSASYYMQRGLASAGAQPELHGSPGPGIRSLSNPNLPFQPGIGGGGAIGSTLSVESSAISPHGVNVGAPPGAPPGEPVKRRRGRPRKYGPDGSVSLALTPSSSGHPSGALTQSQKRGRGRPPGSGKKQQLASLGELMSSSAGMGFTPHIITIAVGEDIATKIMAFSQQGPRAVCILSANGAVSNVSLRQSSSSGGTVTYEGRFEILCLSGSYLLTESGGSRNRTGGLSVSLASPDGRVIGGGVGGLLIAASPVQVIVGSFIWGGSKTKSKKKEAADEAEVAMESDHQHQHHHHHQQHQAVHNPPALNSMSPNQNLTQASSMSSWPAASRQLDMRNSHVDIDLMRG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0027 355 MobiDBLite consensus disorder prediction 278 299 - -
Acco07g0027 355 FunFam AT-hook motif nuclear-localized protein 1-like 157 288 - -
Acco07g0027 355 Pfam Plants and Prokaryotes Conserved (PCC) domain 157 270 IPR005175 -
Acco07g0027 355 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 74 330 IPR039605 GO:0003680
Acco07g0027 355 MobiDBLite consensus disorder prediction 278 340 - -
Acco07g0027 355 ProSiteProfiles PPC domain profile profile. 151 291 IPR005175 -
Acco07g0027 355 MobiDBLite consensus disorder prediction 310 340 - -
Acco07g0027 355 MobiDBLite consensus disorder prediction 105 128 - -
Acco07g0027 355 CDD DUF296 156 270 IPR005175 -
Acco07g0027 355 SUPERFAMILY AF0104/ALDC/Ptd012-like 155 272 - -
Acco07g0027 355 Gene3D - 157 302 - -
Acco07g0027 355 MobiDBLite consensus disorder prediction 23 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0027 Acco-ChrAcco07 281250 284989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0027 1 355 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.270 3.83e-89 270