Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0019 ATGGGAAGAACCCCCTGCTGTGACAAGAAGGGTTTGAAGAAGGGGCCCTGGACGACTGAAGAGGATGAGCTTCTTGTTAATTTCATCAACAAGAACGGTGGCCATGGCAGCTGGCGTTCTCTCCCTAAGTTGGCAGGTCTGCTTCGCTGTGGGAAGAGTTGCAGGCTAAGGTGGACCAACTATCTGAGGCCTGACATAAAGCGTGGTCCATTTAGTGCTGAGGAAGAGAAGCTTGTCATACAGCTTCATGGCATCCTCGGTAATAGGTGGGCGGCGATAGCGTCGCAGATGGCAGGAAGAACAGACAATGAGATAAAGAATCTGTGGAACACTCACTTGAAGAAGCGACTCCAATGCATGGGACTCGACCCTCTCACCCACAAGCCTCTCTCTTGTTCTTCTTCCCGTTGTGATCCCAGCAAGCCCCACGTGTCGACGCCGACGCGCCACATGGCTCAGTGGGAGAGTGCGAGGCTGGAGGCGGAAGCTCGCCTCTCCAAAGACACCTCTCTCTCTCACTATTCCTCCTCCGACTTGTTCCTCCGCCTCTGGAACTCCCAGGTGGGTGACTCCTTCCGCAACATGCACGCCGTCTCCTCTCCCGCCTCCTCCTCTTCCGTGAAGTGCACCACCGTCGCTGCTCCCTCTTTCTCTGAGAAGCTCACGGCTGCCTCTGACGACTCTTCCATCTCTAATGACCCGGAAGACTCCTCTGACACCGCCTTGCAGCTCTTGTTGGATTTCCCCATTTACAATGACATGAACTTCCTAGAACCTAACTGTTTCATTTCTCCCCTTTAG 801 0.5418 MGRTPCCDKKGLKKGPWTTEEDELLVNFINKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFSAEEEKLVIQLHGILGNRWAAIASQMAGRTDNEIKNLWNTHLKKRLQCMGLDPLTHKPLSCSSSRCDPSKPHVSTPTRHMAQWESARLEAEARLSKDTSLSHYSSSDLFLRLWNSQVGDSFRNMHAVSSPASSSSVKCTTVAAPSFSEKLTAASDDSSISNDPEDSSDTALQLLLDFPIYNDMNFLEPNCFISPL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0019 266 Gene3D - 70 117 - -
Acco07g0019 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Acco07g0019 266 FunFam MYB transcription factor 69 130 - -
Acco07g0019 266 Gene3D - 11 68 - -
Acco07g0019 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Acco07g0019 266 SMART sant 13 64 IPR001005 -
Acco07g0019 266 SMART sant 67 115 IPR001005 -
Acco07g0019 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 216 - -
Acco07g0019 266 CDD SANT 16 62 IPR001005 -
Acco07g0019 266 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Acco07g0019 266 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Acco07g0019 266 CDD SANT 70 113 IPR001005 -
Acco07g0019 266 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Acco07g0019 266 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Acco07g0019 266 FunFam Myb transcription factor 11 68 - -
Acco07g0019 266 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0019 Acco-ChrAcco07 226106 227378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0019 1 260 MYB Transcription Factor Family AT3G61250 63.158 2.88e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco07g0019 Myb_DNA-binding 2.1e-13 CL0123