Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0015 ATGTTCAGCGGAACGCAGGACAAGTGCTCGGTGTGTGAAAAGACAGTGTATCCTCTGGAGAAGATGACGCTGGAAGGAGAATGCTTCCACAGGTCGTGCTTCAGGTGTGCCCATGCAGGCTGCCCCCTCACCCATTCCTCCTACGCCGCCCTCGACGGCGTCCTCTACTGCAGGCACCACTTCGCCCAGCTCTTCATGGAGAAGGGAAATTACAACCATGTCCTCCAGGCTGCCGCCCACAAGCGCTCCGCCAGCTCTGGCGCCGGCACTCCTCCTGCCGAACCTGAACCTGCTACTAACGACGACAACGCCACCCCTCCTCTTCATGCCAAAGATGAACATCATCATGACGACGACGACGAGAAAGAAGACCACTCTTAG 381 0.5774 MFSGTQDKCSVCEKTVYPLEKMTLEGECFHRSCFRCAHAGCPLTHSSYAALDGVLYCRHHFAQLFMEKGNYNHVLQAAAHKRSASSGAGTPPAEPEPATNDDNATPPLHAKDEHHHDDDDEKEDHS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0015 126 SMART lim_4 8 60 IPR001781 -
Acco07g0015 126 FunFam LIM domain and actin-binding 1 3 73 - -
Acco07g0015 126 Pfam LIM domain 9 64 IPR001781 -
Acco07g0015 126 Gene3D Cysteine Rich Protein 3 73 - -
Acco07g0015 126 ProSiteProfiles LIM domain profile. 7 67 IPR001781 -
Acco07g0015 126 MobiDBLite consensus disorder prediction 78 126 - -
Acco07g0015 126 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 2 34 - -
Acco07g0015 126 PANTHER OS06G0237300 PROTEIN 5 86 - -
Acco07g0015 126 MobiDBLite consensus disorder prediction 106 126 - -
Acco07g0015 126 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 35 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0015 Acco-ChrAcco07 209520 209900 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco07g0015 LIM 6.8e-11 CL0167