Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3160 ATGGGCGTGGAGAATGAGATTTCTCCGGCCGATGCTCATGGGGCTCCCGGCAAGGAGCAGCAAGCTGCCGGAGTGGGAATTCTTCTTCAGATCATGATGTTGGTTTTGTCTTTCGTTCTGGGTCACGTCCTTCGTCGCAAGCGGATATATGTTATTCCTGAAGCAAGTGCTTCTCTTCTCATAGGTTTAATTGTTGGTGGACTTGCTAACGTTTCAGACACAGAAACTAGTATCAGGTCATTGCAATGCCTATCGGTTACACTATCTGTTTACAAGATTTCCAAGGACGAGACTTTTCTAATGTCATCTACTTATATGGGTACGCTATATTGCCTTTTCTTTTCCTTGACTGTTGAGTTTACTCAGTCTGGTTTCAGTCTCTCACCTAAACCTTTCTTCTCAAATTTTGGAGCAATTGTGACATTTGCTATATTTGGTACCTTTATTGCTTCAGTAGTCACCGGTGTTTTAGTTTATCTTGGTGGTTTACTCTACCTCATGTATAAACTTCCTTTTGTGGAATGCCTAATGTTTGGTGCTTTGATATCAGCAACTGATCCTGTTACTGTTCTATCCATATTTCAGGAGCTTGGCACAGATGTCAACCTCTATGCCCTGGTGTTTGGAGAATCAGTCTTGAATGATGCAATAGCAATTTCCTTGTACAGGACGATGTCATCAGTCAAATCTAACCATTCTGGACAAAATTTCTTCATGGTGGTTGTGAGATTTTTGGAGACTTTTGTTGGTTCGATGTCTTCAGGATTGGATATTGATAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCGTATTTCTCGTATATGCTTGCAGAAGGTCTGGGCTTATCTGGTATTGTATCAATACTGTTTACGGGAATAGTCATGAAGCATTACACATATTCCAATTTGTCTGAAAGTTCTCAAAGATTTGTCTCTGCATTTTTTCATCTAATATCATCACTGGCAGAAACATTCATACCTGCAAACCGAAAGATACCCCCAAAACATCAGAAAGCACTTTGGTACAGTGGTAAGGAAAGGAACACTGTTGTTATTACTGAAAACGCTGTGGAGAGACTTCGAGGGGCAATGGCATTTGCGCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGGCAGACCATATTCTCTGCAACTACAGCTATAGTTGTTTTAACGGTATTACTGATTGGTGGTTCAACGGGGACTATGCTGGAAGCCCTAGAAGTTGTTGGTGACAACCATAACATTGACAATGCTTTGGGTCCAGTAGGCAACACCAATAATTTTGAAGGAGACCATGGTTATATTGCTCCTTCATATGATGAAGAATCTTCGTCAGGCAACAAAATCAAAATGAAATTGAAAGAGTTTCGTAGGAGTGCTGCGTCTTTTACAGCTTTAGATAAAAATTACCTCACCCCATTCTTTACAAGTCAAAACGGAGATGAAGATGATGAAGAGGAACCTTTTACTACCAGAAGAAGCTTCCAGGGCAATGATCATTACTACAGTAATTCTCGCTAA 1542 0.4073 MGVENEISPADAHGAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKRIYVIPEASASLLIGLIVGGLANVSDTETSIRSLQCLSVTLSVYKISKDETFLMSSTYMGTLYCLFFSLTVEFTQSGFSLSPKPFFSNFGAIVTFAIFGTFIASVVTGVLVYLGGLLYLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAIAISLYRTMSSVKSNHSGQNFFMVVVRFLETFVGSMSSGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYTYSNLSESSQRFVSAFFHLISSLAETFIPANRKIPPKHQKALWYSGKERNTVVITENAVERLRGAMAFALALQSVHDLPEGHGQTIFSATTAIVVLTVLLIGGSTGTMLEALEVVGDNHNIDNALGPVGNTNNFEGDHGYIAPSYDEESSSGNKIKMKLKEFRRSAASFTALDKNYLTPFFTSQNGDEDDEEEPFTTRRSFQGNDHYYSNSR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3160 513 Gene3D - 172 224 - -
Acco06g3160 513 PRINTS Na+/H+ exchanger signature 124 138 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Acco06g3160 513 PRINTS Na+/H+ exchanger signature 139 147 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Acco06g3160 513 PRINTS Na+/H+ exchanger signature 179 189 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Acco06g3160 513 Pfam Sodium/hydrogen exchanger family 33 318 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Acco06g3160 513 PANTHER SODIUM/HYDROGEN EXCHANGER 333 496 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Acco06g3160 513 MobiDBLite consensus disorder prediction 481 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3160 Acco-ChrAcco06 42237385 42245350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3160 20 329 Antiporters AT3G05030 30.514 2.59e-25 107