Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3145 ATGTATCAGCCAAACAGCGTTACTAGTTTAAGTCTACTAGGAAGCAACTCATTGGTACGTAGTCAGCAATTTGATCGTGGTAGCAGTACAATGGACCCAGTCAATGGAGGGAATAGTCTCACCAACAATCCCAATCTGAGCTCAAAGCAACGGCTACGCTGGACACATGAGCTCCATGAATGCTTTGTTGACGCTGTGGCGCAGCTTGGTGGGCCTGATCGTGCCACACCTAAAGGTGTCCTCAGAGTGATGGGTGTACAAGGCTTAACTATATATCACGTCAAAAGCCATCTGCAGAAATATCGTCTTGCTAAATACCTCCCTGACTCCTCATCTGATGGGAAAAAAGATGACAAGAAAGAAACTGGAGATATGCTTTCCAATCTGGATGGTTCACCAGGGATGCAGATTACTGAAGCACTAAAGCTGCAAATGGAGGTGCAAAAGCGATTACATGAGCAATTAGAGGTTCAGAGACAGCTACAGCTTCGGATTGAAGCCCAGGGCGAATACTTGAAGAAGATAATTGAAGAGCAACAGCAGCTCAGTGGTGTTCTTTTGCAAGCACCCGGCTCTGGGGATGCAGCCTCAGTGCCTGTTGACACCTGCCAAGACCCTGACAATAAGAATGATCCATCAACCCCTGCCCCTTCATCTGAGTGCCTCTTTCAGGAAAAAGCTTCCAAAGAACGTGCTCTGGCAAAGATTCTCTCAATCGATGAATCCTTTTCATCTCACAACGAACCATTAACACCAGATTCTAGCTGCCATGCTGGTTCCCCTACCAACAGCCCTAGAGAGAAGAGAATGACAAAAAAGCAGCGGTTGAGCACGGAGGGAGCATATTCTAAACCTGAAACGGTGCTTCCACATCATATACTTGAGTCGAGCATGTCATCGAGTCCATCATTAAACGGAGTGTTTCCTGCCCATGAGTAG 939 0.4686 MYQPNSVTSLSLLGSNSLVRSQQFDRGSSTMDPVNGGNSLTNNPNLSSKQRLRWTHELHECFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKDDKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGEYLKKIIEEQQQLSGVLLQAPGSGDAASVPVDTCQDPDNKNDPSTPAPSSECLFQEKASKERALAKILSIDESFSSHNEPLTPDSSCHAGSPTNSPREKRMTKKQRLSTEGAYSKPETVLPHHILESSMSSSPSLNGVFPAHE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3145 312 MobiDBLite consensus disorder prediction 109 125 - -
Acco06g3145 312 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Acco06g3145 312 MobiDBLite consensus disorder prediction 108 133 - -
Acco06g3145 312 MobiDBLite consensus disorder prediction 190 219 - -
Acco06g3145 312 Gene3D - 48 107 - -
Acco06g3145 312 FunFam Myb family transcription factor 48 106 - -
Acco06g3145 312 MobiDBLite consensus disorder prediction 244 265 - -
Acco06g3145 312 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Acco06g3145 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Acco06g3145 312 MobiDBLite consensus disorder prediction 244 312 - -
Acco06g3145 312 MobiDBLite consensus disorder prediction 23 46 - -
Acco06g3145 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Acco06g3145 312 Coils Coil 138 158 - -
Acco06g3145 312 MobiDBLite consensus disorder prediction 203 219 - -
Acco06g3145 312 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Acco06g3145 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 43 301 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3145 Acco-ChrAcco06 42024385 42027134 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3145 84 301 G2-like Transcription Factor Family AT2G01060 66.364 1.56e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco06g3145 Myb_DNA-binding 9e-08 CL0123