Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3143 ATGTATCCCAGACTGATTCGCTCGCACGAAGGGATGGTTGGTCAGGAAGACATGCTGGGTGGTGGGTCAAACCACCATGGAGACCCATGCTTAGTGTTGACCGCCGATCCCAAACCTCGTCTCCGTTGGACCCAAGACCTCCATGAACGATTTGTCGATGCTGTTACTCAGCTTGGCGGTGCTAGCAAAGCTACACCAAAAGCACTCATGCGGACCATGAATGTGAAGGGTCTGACTTTATTTCATTTGAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGCAAAGATATGATTGAGGGATGCAATGATGGTTCATATCTTTTAGAAAGCCCTCATACTGATAAGTCTTCCCCAAAGTTGCCAGCTTCTGATACAAACGAGGGTCATGAAATCAAGGAGGCTTTAAGAGTACAGATGGAAGTACAAGGTGAACTACATATGCAAGTGCAGGCAGAGAAGCATTTGCAGATTCGCCAGGATGCAGAACAAAGATACATGGCCATGCTCGAAAGGGCTTGCAAGATGCTGGCGGATCAGTTTATTGGGGTTACGGTTATAGATACAGACAACCAAAGATTTCAAGGACAATATGGAAATAAAGCACCAAGAGCTCCCATTGTTGACCCTCTTGGCTTTTACTCCTTACCGTCTACTGGTATAACTGGAGCGGTTTATGCTTCAGGAGAAGAATTACCTGATCTCCATTCCCAAAGGGCTGACTGTTCAACCGAAAGTTGCCTAACATCGCAGCATGAAAGCCCCGGAGGTTTGACATTGGAAGGATCTCCCATTAGTGGTGGGGCAAACAAGAGGATGCTGAGCTTAGAATCCATGACAGCAGCCCCTTTAATATGGAGTCAAGCCACCATGAGAACTCAAGGCATCAATGTGGCCCAAGGTAACATACATGGAATAACTGAGCATGGCATGTAG 942 0.466 MYPRLIRSHEGMVGQEDMLGGGSNHHGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKALMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMIEGCNDGSYLLESPHTDKSSPKLPASDTNEGHEIKEALRVQMEVQGELHMQVQAEKHLQIRQDAEQRYMAMLERACKMLADQFIGVTVIDTDNQRFQGQYGNKAPRAPIVDPLGFYSLPSTGITGAVYASGEELPDLHSQRADCSTESCLTSQHESPGGLTLEGSPISGGANKRMLSLESMTAAPLIWSQATMRTQGINVAQGNIHGITEHGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3143 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
Acco06g3143 313 Pfam MYB-CC type transfactor, LHEQLE motif 133 178 IPR025756 -
Acco06g3143 313 Gene3D - 37 95 - -
Acco06g3143 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 255 IPR044848 GO:0003700
Acco06g3143 313 MobiDBLite consensus disorder prediction 108 129 - -
Acco06g3143 313 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Acco06g3143 313 FunFam Myb family transcription factor 37 95 - -
Acco06g3143 313 MobiDBLite consensus disorder prediction 112 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3143 Acco-ChrAcco06 42009408 42013031 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3143 6 274 G2-like Transcription Factor Family AT4G13640 44.043 2.63e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco06g3143 Myb_CC_LHEQLE 1.1e-13 No_clan