Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3140 ATGGAGAATTTGAAGGGCATACTTTTTTCGAAGTACAGTGTGCAAGTAGCTATGCGTAACAACAGGGAGCTTTGCAGAAATTTTCAGCGAGGCAGCTGCCAGTATGGAGAAAGGTGTAAATTTCTTCACAGTCTGCCACAACAGCAAAAACAAACAACCAATCCTTTTGGATTTGGGTCCCACTCCAGTTCGCACCAAAAACAAACTACCAATCCTTTTGGATTTGGGTCCCACTCCGGTTCCCAGCAACAGCATAAGACCAATCCTTTTGGATTTGGTGTGCAGAATAGCTCCCAGTCAGCTGGGGGTGCTAGTTCAGAATTCAAACACCAGTTCAAGCCTTTTGATAACAAATGGACTCGTTCTTCTTCCTCACCCCTAAATAGTGCTTCACGAACAACTGAGACCAATTCTCGAGATCATAAGTGCACGGATCCTGAAACTTGCAAACGTCAGATTGTAGACGATTTTGAGCATGAGAAAACACTTTGGAAGCTTACATGCTATGGTCATTGTAGAGGTGGTCCTTGTGACATTGTTGGTGATATTAGCTATGAAGAATTGCGGGCAGCTGCATATGACGATGCTAATCGTGGGATGACATTACAATCAATTGTTGAGAGAGAGAGAAATCTACTAAGTTCCAAGTTAGCGGAGTTTCAGAACCTTATTCGTGAACCTTACAAAATACAGCTGAGTTCTTCTCTTACAAGTGATAAGTATCAATCTCCTGGAATTGATGCAAACCCATTTTCAAGGACTTCACAATATAATGATCCTCTGTCTGTCTCTAGCTTTAGTCAACTAGGGACATCATTGAACATGGGTATTGAAAGGCCTTCTGCACCCCCAGTAGATACTCTGGCTCAACCTATCTCCTTTGAAAGTAGAGGAAATCCGTTGGCATCCCATGTGATGAACCCAACTGGCGGAGGCATTGCAGATGACCAAACTAACGTCTTTCCCACATCAGCAGTAGTTCCAAAGTTTCCCAGTGTTACTCCACTGCAATCATTTATTGCGAGCAATGGCCCTAGTTCTGATACAATGTTTCCAGCAAGCATGGGTGTTCAGTTGTCAAGCAAGTCCAATGAGAATGTCTCTGGAGATACCAGTATTTGGTTAAAAGAGAAATGGATTCCTGGAGAGATTCCCGAAGAAGCTCCTCCTGATGCCTTTGTAAGGTAG 1188 0.4335 MENLKGILFSKYSVQVAMRNNRELCRNFQRGSCQYGERCKFLHSLPQQQKQTTNPFGFGSHSSSHQKQTTNPFGFGSHSGSQQQHKTNPFGFGVQNSSQSAGGASSEFKHQFKPFDNKWTRSSSSPLNSASRTTETNSRDHKCTDPETCKRQIVDDFEHEKTLWKLTCYGHCRGGPCDIVGDISYEELRAAAYDDANRGMTLQSIVERERNLLSSKLAEFQNLIREPYKIQLSSSLTSDKYQSPGIDANPFSRTSQYNDPLSVSSFSQLGTSLNMGIERPSAPPVDTLAQPISFESRGNPLASHVMNPTGGGIADDQTNVFPTSAVVPKFPSVTPLQSFIASNGPSSDTMFPASMGVQLSSKSNENVSGDTSIWLKEKWIPGEIPEEAPPDAFVR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3140 395 ProSiteProfiles Zinc finger C3H1-type profile. 19 46 IPR000571 GO:0046872
Acco06g3140 395 SMART c3hfinal6 20 45 IPR000571 GO:0046872
Acco06g3140 395 MobiDBLite consensus disorder prediction 117 134 - -
Acco06g3140 395 MobiDBLite consensus disorder prediction 50 106 - -
Acco06g3140 395 Gene3D - 21 50 - -
Acco06g3140 395 PANTHER NUCLEOPORIN-LIKE PROTEIN 2 117 254 - -
Acco06g3140 395 SUPERFAMILY CCCH zinc finger 18 47 IPR036855 GO:0046872
Acco06g3140 395 MobiDBLite consensus disorder prediction 50 145 - -
Acco06g3140 395 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 22 44 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco06g3140 zf-CCCH 7.6e-10 CL0537