Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3129 ATGATGGCATCGTCCCAGGTTGAAATGGCTCAAACATCGCCTTTTGGTTGTGTTCTGAGAAAATATAATCATCGTGAGAGCTTCAGGGAAAGTGCTTCTTCTCGAGTTTCTTCATCGTCACAAGCACCAACCTTCCAGAACAATGACAGAAGGAACTTTGTCGACAAAATCTGCAATAGTAATGAAGCATCACAAGCTGCGAACAACAACAACGTAGGATTCGCGAAGAAGGAGAATAAAGAAGATGAATCCTTATCCTCGTCCTCGAACTACAACAACAACAACGTTAATACGAGGCAACAGTCACAGATTCTGGATCGATGGGCTGCAAGAAAAGCAAAAGAAATGGTATCAACAATTGAGACAGAAGCTGAGCTTTTGGAGAATATGGGTTCTAATTCTAATACTTCTACTTCATCATCATCGTCAGAAACAATATTGAATAATCGTGGAGCTTCGTCTCTTGTTCAGATCTGGGAAAAGAGGTTAAATAACCTGAACCAATCATCACCACTCAGGTGCAATACAGGTACAAGCAGAACATCGTCGTTTGGGTCATCAGATGTTGGAGAAATATTCACGGATGAAACATCATCGTCATCATCGTATTCAGATTGGGTGGTAGGTGATACAAATATTGAAGCTACGACATGTTCAACGCCAAAGGTGGCAGACATTATAAAGAGATTGAAGGAGAATAAGTATGAACAAAGCAATAATAATACGATGATGATGATGGGATCCTCGGGTTTGTCAAGTAGTAGATCGGAAACGAGCCCGGTGGTTCCTTCGCCTCGCATCCGAGGCCGGCAAGCGTTTACAGATTTGCTGATGCAGATGGAACGTGACAAACATGGAGAACTCAACAATCTGGCTCAGCTTGCACCTGTTTCCAACTTTTCCCAAAGAGGTCGAGGTCGTATTCAGTCACTCATGCGGCTTAGATTATTGAAACGACACCATGAATCAACACTATATGAAGTGAATAGACCACCAAAAGGGTCCCCATCAATTATGCAGTTGAGGGAAAGATTTAATGCAGAAGTGAAACAAGGAAGTACAACTGAATCAGAAATAGTTAGTTCAAGAAATACCCGCCCTGATCAACCCGAAGACCCGAGGGGTCAGCACGGGTTGAATCCGATCCGGATGTACCGGGCTGTCAATGTGACAAATGACTGCCAAAATGCTAATGATTACCCATCAGCAGCGTGGGCTCAAAAACCAGAGTCCCAAACAAATGAAGAAGAAGAAGAAGAAGACGACGACGAAGCTCATGCAAGTTCATCAGAAATAGTATTCTCAGAGGCTCAGAAAATTATTGCATCACAAGAAGTTGGCGAGACAAGTACTTGTTGCAATAATATGGTTGATTCATCAGAAGCAAATCGTCATGAGACAAAAGATGAACCAGACATGGAAGAGGTAAAGCAGCTGGATATAATATATGGTGCCGAAGAAACTGAAATCATCAATAATAATTATGTGGATGAAACAAGAACAATGGATAATATTGAAGAAGATCATCAAGAATATGCCAGTGAAAGCATCAATGATTATGATCATGATGATGAAGAAAATTATTACGATTGGATGAGTCCTATTGCTCGCCCTAGAAGTTATTGGGAAGATCGTAGACAAGCCTGGTACAAGGAGATGCTTGACAATGCTGCTTCTGATAATAAAGAAGAGATACGCCAACTTCTTGAACGAAGAAGTGTTTCAACTTTGCTTTCAAGTGACATGAGAGAAAGAATGGACAAATTGATGGAATATCACATAGGAACCCAAACACAATTTATGAGTAGTAGCCAAGAAGATGATGAAGACAACAATGGAGGTGGGAGAAGAATGGGGCAACTAATGTCATTTTTGCAACAACACATACAGCGTCGTGGCCGTAACCTTGAAGAAAAGGAAGAAGCTGAAAAACAAGAGGCGCGAGAAGAAGAAGAAGAAGAAGAGAGCTTGATGATAATTAATGGTGGTGGTTATAATGAAACCAGCTCTGATGATTGTAATCAATCGTCGTCGAGACAGATTGTGATTTCGTCTTCTCCAAATATGTCATCATGGAGCTATAGAGAGAACGAAGCCCCCAGTGATGATTCTGAGGACAGAGTTGATGAGTCTGCTACATGTTCAATACAACCTTCTCCATGTCAATCTTTCTACCTAGATTGTCGCCAATCCTCCTCCACCATTAATCCTCATCCAATGGAAATGCATTTGATATATGATATGAGGGGGCAGATGGAGAAACTACATAGAGAAATGGCCGAGATAAGAAAATCACTAAAGAGCTGCATAGATATGCAGATGATACTACAGAAATCAATGAAGCGCGAAGTTAACAACACAGCTAGAGAAAAGAAGGCTAAGAAGAAGAAGGGCAATGAAGAGAAGGGAGATGAAAAGAAAGGGAAATGCTGTATATGCTACGAGAAGAAAGTGGACTCAGTTTTGTATAGATGTGGGCACATGTGTACTTGTATCAAGTGTGCCAATGAGTTGCAATGGAACAGTGGCAAGTGCCCTATATGTCGAGCTCCCATAGTTGATGTTGTTAGAGTTTACGTGAATTCTTAG 2589 0.4121 MMASSQVEMAQTSPFGCVLRKYNHRESFRESASSRVSSSSQAPTFQNNDRRNFVDKICNSNEASQAANNNNVGFAKKENKEDESLSSSSNYNNNNVNTRQQSQILDRWAARKAKEMVSTIETEAELLENMGSNSNTSTSSSSSETILNNRGASSLVQIWEKRLNNLNQSSPLRCNTGTSRTSSFGSSDVGEIFTDETSSSSSYSDWVVGDTNIEATTCSTPKVADIIKRLKENKYEQSNNNTMMMMGSSGLSSSRSETSPVVPSPRIRGRQAFTDLLMQMERDKHGELNNLAQLAPVSNFSQRGRGRIQSLMRLRLLKRHHESTLYEVNRPPKGSPSIMQLRERFNAEVKQGSTTESEIVSSRNTRPDQPEDPRGQHGLNPIRMYRAVNVTNDCQNANDYPSAAWAQKPESQTNEEEEEEDDDEAHASSSEIVFSEAQKIIASQEVGETSTCCNNMVDSSEANRHETKDEPDMEEVKQLDIIYGAEETEIINNNYVDETRTMDNIEEDHQEYASESINDYDHDDEENYYDWMSPIARPRSYWEDRRQAWYKEMLDNAASDNKEEIRQLLERRSVSTLLSSDMRERMDKLMEYHIGTQTQFMSSSQEDDEDNNGGGRRMGQLMSFLQQHIQRRGRNLEEKEEAEKQEAREEEEEEESLMIINGGGYNETSSDDCNQSSSRQIVISSSPNMSSWSYRENEAPSDDSEDRVDESATCSIQPSPCQSFYLDCRQSSSTINPHPMEMHLIYDMRGQMEKLHREMAEIRKSLKSCIDMQMILQKSMKREVNNTAREKKAKKKKGNEEKGDEKKGKCCICYEKKVDSVLYRCGHMCTCIKCANELQWNSGKCPICRAPIVDVVRVYVNS 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3129 862 MobiDBLite consensus disorder prediction 85 99 - -
Acco06g3129 862 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 784 861 IPR013083 -
Acco06g3129 862 MobiDBLite consensus disorder prediction 30 51 - -
Acco06g3129 862 PANTHER BNAC05G24000D PROTEIN 2 862 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 783 805 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 396 410 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 64 99 - -
Acco06g3129 862 ProSiteProfiles Zinc finger RING-type profile. 810 849 IPR001841 -
Acco06g3129 862 MobiDBLite consensus disorder prediction 630 656 - -
Acco06g3129 862 Coils Coil 625 657 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 396 429 - -
Acco06g3129 862 CDD mRING-HC-C3HC5_NEU1 807 859 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 347 364 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 127 146 - -
Acco06g3129 862 Coils Coil 110 130 - -
Acco06g3129 862 SMART ring_2 810 848 IPR001841 -
Acco06g3129 862 MobiDBLite consensus disorder prediction 685 707 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 597 618 - -
Acco06g3129 862 Pfam Zinc finger, C3HC4 type (RING finger) 807 854 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 32 51 - -
Acco06g3129 862 Coils Coil 551 571 - -
Acco06g3129 862 SUPERFAMILY RING/U-box 809 855 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 451 473 - -
Acco06g3129 862 MobiDBLite consensus disorder prediction 347 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3129 Acco-ChrAcco06 41737539 41741750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3129 765 862 C3H Transcription Factor Family AT3G06140 30.612 1.77e-09 58.5