Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3115 ATGGTTTCTTCTTTGCCTCTTTCTCAGCCTACTAGTCACAGCTTCTTCTCTAAAACCCAGTTGAGAGGATTTGGCCATGGGTCCCGGCGACCAAGCTCCTTATTTTGCCGCGACTTCGAAAGCAAAGTTCGACCCATCAAAGCATTAGTTGATACAGCCCCGTTCCCCTTGTTGCAACCTTCCAAAGTTGAAGAGTCGTCGTCTGAGTTGGAGCCAGCAGACCCAGATTTCTACAAGATAGGTTTTATTCGAAGCATGCGAGCTTATGGAGTTGAGTTTAAGGAAGGGCCTGATGGGTTTGGTGTGTATGCTTCTAAAGATGTAGAACCTCTTCGCCGAGCCAGGGTTATAATGGAAATACCTCTTGAATTGATGTTAACTGTGAGTCAGAAGCTCCCATGGATGTTCTTTCCTGATACAATTCCTGTGGGACATCCAATATTTGATATTATCAACTCAACAAATCCAGAGACAGATTGGCATCTAAGATTAGCATGCCTGCTGTTATATGCATTGGACTGTCAGGACAACTTTTGGCAGTTGTATGGTGACTTCTTACCCAGTGCTGATGAATGCACTAGCTTACTTCTGGCAACAGAGGAGGAACTTTCGGAGCTGCAGGATCCAAATCTTGCATCTACCATCAGGAACGAGCAACGTCGTGCCTTGGAATTTTGGGAGAAGAATTGGCACAGTGGTGTTCCCCTTAAAATAAAGCGTCTTGCTCGTGATCCACAAAGGTTCATGTGGGCAGTAGGTATAGCACAGTCACGATGCATTAACATGCAAATGAGGCTTGGCGCACTACATCAAGATTCAAATATGCTGATTCCTTATGCTGACATGCTGAACCATTCATTTGAGCCAAATTGCTTTTTCCATTGGCGCTTCAAGGACCGGATGGTTGAGGTCCTTATAAATGCTGGACAGAGGATTAGAAAGGGAGATGAGATGACGGTTGATTACATGAGCAGACAAAAGAATGACATGTTTATGCAAAGATATGGCTTCTCATCACCTGTGAATCCTTGGGATGAGATCAAATTCTCTGGAGATGCACGTATACATTTGGATTCCTTCTTGTCAGTGTTCAACATATCGGGCCTTCCTGAAGAATATTATCATAACACTCTACTATCTAACAAGGGCGATACTTTTGTTGATGGAGCAGTCATAGCTGCGGCACGTACACTACCAAGTTGGTCAGATGGGGATGTACCTCCAATCCCTAGTGTGGAATGGAAGGCTGCGAAGGAGTTACAAAATGAAAGCCAGGAAATGCTTGCAGAATTTCCCACAACCTCCAAGCAAGATCAAAAATTGCTAGATTCATTGCAAGATGCAACCAGGACTCTTGAAGCTGCAATAAAGTACAGATTGCACCGGAAATTGTTCATAGGGAAAGTCATCCAAGCATTAGACATGTATCAAGAGAGATTACTCTTCTGA 1449 0.4396 MVSSLPLSQPTSHSFFSKTQLRGFGHGSRRPSSLFCRDFESKVRPIKALVDTAPFPLLQPSKVEESSSELEPADPDFYKIGFIRSMRAYGVEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTVSQKLPWMFFPDTIPVGHPIFDIINSTNPETDWHLRLACLLLYALDCQDNFWQLYGDFLPSADECTSLLLATEEELSELQDPNLASTIRNEQRRALEFWEKNWHSGVPLKIKRLARDPQRFMWAVGIAQSRCINMQMRLGALHQDSNMLIPYADMLNHSFEPNCFFHWRFKDRMVEVLINAGQRIRKGDEMTVDYMSRQKNDMFMQRYGFSSPVNPWDEIKFSGDARIHLDSFLSVFNISGLPEEYYHNTLLSNKGDTFVDGAVIAAARTLPSWSDGDVPPIPSVEWKAAKELQNESQEMLAEFPTTSKQDQKLLDSLQDATRTLEAAIKYRLHRKLFIGKVIQALDMYQERLLF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3115 482 CDD SET_LSMT 90 337 - -
Acco06g3115 482 SUPERFAMILY SET domain 98 338 IPR046341 -
Acco06g3115 482 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 83 337 - -
Acco06g3115 482 ProSiteProfiles SET domain profile. 78 323 IPR001214 GO:0005515
Acco06g3115 482 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 478 IPR036464 -
Acco06g3115 482 Gene3D - 359 480 IPR036464 -
Acco06g3115 482 Gene3D set domain protein methyltransferase, domain 1 82 337 - -
Acco06g3115 482 FunFam Plastid transcriptionally active 14 359 479 - -
Acco06g3115 482 Pfam SET domain 99 322 IPR001214 GO:0005515
Acco06g3115 482 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 61 450 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco06g3115 SET 8.9e-20 No_clan