Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3110 ATGGAGGGTTTTCACCCACTTATTACTTGCTCTTCATCATCATCACCATTTGCTTACACTTTCAATCTCAGTGCCGCTGGCTCTTCTGGTAATGTTTCATCTTCTTCAAATACATACACCACTCCATGGATGGACTGTAGAATATGGAGCAAGCTTCCTCCAAGAATTCTTGACAGGATCTTGGCTTTTCTTCCTCTTCCTGCTTTCTTCCGAACACGTTGTGTCTGTAAGAGATTCTATGGCCTCTTGTTTTCCAACAGTTTCCTTCAACTTTACCTCCAAATCTCACAACCCCACCATTGGTTCATTTTCTTCAACCTCAACAAAACCCTAAAGAGCAGCTTTATCTACACCACCAACAACCCTAGTACCAGTCGTGGTGCTATTACTGCTGGTGCTGCTGCCACACAATATTGTGAAGCGTACCTGTTTGATCCGTATGAGATCGCATGGTACCGTATTCCATTTCCTCTTGTCCCTTCTGCTTTTTCTCCATGTTCTTCTTCTTCAGGCCTGGTCTGTTTTGTTTCAGACGAGGCTAGTCCCAAGACTCTTATTTTCTACAATCCCATAATCGGCACTATAACTCAACTACCTCCCACAATAAGGCCAAGGCTTTTCCCTTCCATTGGCGTAGCCATTTCCCATTCATCCATAGATCTCACGGTTGCCGGCGACGACATGATTTCGCCTTACGCCGTGAAAAACCTAACTTCTGAAAACTTCCATATCGACTCGAGCGGGTTTTATTCCATATGGGGGACCACATCTTCGCTTCCTAGACTTTGTAGTCTGGAATCTGGTAAGATGATTCATTCAGGAGGGAGATTCTACTGCATGAACTATAGCCCATTTAGTGTGTTATGTCATGATATTTCCTCAAACAATTGGTCTAAAATCCAAGCTCCAATGAGGCGATTCTTAAGGTCTCCGAGTTTGATTGAGAGCAAAGGGAAGTTATTGTTAGTTGCAGCAGTTGAGAAGAGCAAGCTTAATATTCCGAGGAGCTTAAGGGTTTGGATTCTTCAGGCTTGTGGGACAACATGGGTTGAGACAGAGAGGATGCCTCAACAACTTTATGTGCAATTTGCTGAATTAGAAGGAGGGAATGGTTTTGATTGTGTAGGGCATGGTGAGTTTATTGTGTTAATGATTAGAGGAACAGATAAGGTTTTGTTGTTTGATATTTGCAGAAAGAGGTGGCAGTGGATTCCTCCATGTCCTTATGTTGTTGCTTCAAGTGGTGGAGGTAATGCTTCATCTTCTTCTGCTTTGCATGGCTTTGCTTACGAGCCTAGACTTGCCACCCCAGTCACTGCTCTTCTGGATCAACTTGCACTTCCATTTTAG 1350 0.4356 MEGFHPLITCSSSSSPFAYTFNLSAAGSSGNVSSSSNTYTTPWMDCRIWSKLPPRILDRILAFLPLPAFFRTRCVCKRFYGLLFSNSFLQLYLQISQPHHWFIFFNLNKTLKSSFIYTTNNPSTSRGAITAGAAATQYCEAYLFDPYEIAWYRIPFPLVPSAFSPCSSSSGLVCFVSDEASPKTLIFYNPIIGTITQLPPTIRPRLFPSIGVAISHSSIDLTVAGDDMISPYAVKNLTSENFHIDSSGFYSIWGTTSSLPRLCSLESGKMIHSGGRFYCMNYSPFSVLCHDISSNNWSKIQAPMRRFLRSPSLIESKGKLLLVAAVEKSKLNIPRSLRVWILQACGTTWVETERMPQQLYVQFAELEGGNGFDCVGHGEFIVLMIRGTDKVLLFDICRKRWQWIPPCPYVVASSGGGNASSSSALHGFAYEPRLATPVTALLDQLALPF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3110 449 ProSiteProfiles F-box domain profile. 46 95 IPR001810 GO:0005515
Acco06g3110 449 PANTHER BNACNNG10540D PROTEIN 27 436 - -
Acco06g3110 449 Pfam F-box domain 49 82 IPR001810 GO:0005515
Acco06g3110 449 SMART fbox_2 52 92 IPR001810 GO:0005515
Acco06g3110 449 Gene3D - 46 90 - -
Acco06g3110 449 Gene3D - 119 417 IPR015915 GO:0005515
Acco06g3110 449 FunFam protein UNUSUAL FLORAL ORGANS 45 89 - -
Acco06g3110 449 SUPERFAMILY Galactose oxidase, central domain 141 410 IPR011043 -
Acco06g3110 449 SUPERFAMILY F-box domain 42 120 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3110 Acco-ChrAcco06 41376114 41377463 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g3110 06 41376114 41377463 Acco06g3110 06 41376114 41377463 ECH