Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3107 ATGGTGTTTTCTGAGAAGCTAACATTCTGGTGGGTACTCTTGGTTGGCTATTTAATGTTGTCCCCATCTCATGTTTCCTCTTTCATGACTTCTTCATCAAACGGTGAAGCAAATGCTTTATTAAAGTGGAAAGCCAGCCTTGACAACCAAAGCCAAGCTCTGTTATCATCATGGAAACATAATAGCAGCCGTCCTTGCAAATGGATTGGAATTACATGCAACGAGTTCAACTCTATTTCCAATATATCTCTTCCTGATATTGGATTGAGAGGTATGCTTAATAGTCTCAATTTCTCATCTTTCCCCAATCTCCAATCCTTAGAACTTGGAGGTAATCAATTTATTGGTTCCATTCCCCATGAAATTGGAATGTTAAAGGAACTAGTTTTACTTAACTTGTCAAGCAACTCTCTCTCTGGTAACATCCCTACCACTTTAGGAAATATGACCAATTTACACGATCTTTCCCTTTCTTCCAACCAAATCTCAGGATCAATTCCATGGGAAATAGGGAAACTCTACTCAATTGAAACATTGGACTTGTCAGAGAACAAAATATTGGGTTCAGTCCCACCCTCTATTTGGAACTTGGTCAATCTAAGTCTCCTCAATTTTTATCAAAACAACCTTTCTGGATTCATTCCTTTTAGAATTGGAAATTTGACAAGGCTCTCCATGCTGTCATTGGGACGAAATGATCTTTTGGGATCTGTTCCTTCTAGTATTGGAAATTTGACAAAGCTTACCTACCTAAATTTGTGTGGAAACAAACTTAGTGGCAATCTTCCATTGGAAATGAATAGCCTTAGGAGAATGGAATCCCTTCAAATTGGAGAAAATTATTTCGAAGGTTATTTCCCTCAAGACATTTGCTTTGGAGGATTACTTGTTAACATCACTGCACATAGGAATCAATTCACTGGTCCAATTCCTAGAAGTTTGAAGAATTGCTCTAACCTTATGAGAGTTAGGTTTGAAAGTAATCAACTAACTGGAAATGTCACAGATGCATTTGGTGTATATCAACACTTAACATACATTGATTTAAGCTACAATGCACTTTATGGTCACTTGTCACCTACATGGGGGCAGTGCCATAACCTTGAAAGCCTCAAGATCTCTGATAATAACTTGTCTGGGGGCATACCGCCAGAACTAAGTGAGGCAACAAAGTTAAATCAACTTGATTTTTCATCAAATCACTTGTCAGGAAATATTCCCAAGGAATTGAGTCACTTGTCATTATTGAGTGAACTTATGCTAGACAACAACCAACTCTCAAAAAGCATTCCTATTGATATAGGATTATTGACAAACCTTGATCAATTGAGTCTAGCTAACAATCATTTAAATGGCTCAATTCCAGAACAATTAGGAGGGTTGACCAAGTTATGGAACTTAAACTTAAGTGGAAATAAATTCTTCAACCTTCCATCTAGTTTGGGAAAATTACAATATCTTCAATTTCTTGATCTCAGTGCAAATTCCTTTTGTGGTGGAATCCCAATAATGCTCAGAAATCTAAAACAATTGGAAAAGTTAAACCTCTCGCATAATAATTTCTCTGGTACGATTCCCTCATTTTTTGATGATTTGAAAAGCTTGACTATGATTGACATCTCGCACAATAAATTAGAAGGTTCACTTCCAAATAATTTTGCCTTTCGTAATGCTTCAATGGAGACATTGAAAGACAACAAAGGCTTATGTGGAAATGTATCTGGCTTGCCAATTTGCCCCACAAGAAGTTATAGTCCAATGCATCTTAAGAGAAACAAATGGTTGACCTATGCTCTATCTCTTGGCTTTGGATCTGTATTTCTAGCAATAGTTTTGATGGGAATTTTATATATTGTTTGCCATCGCAAAGCAAGTCAAGCAAAAAGCCAAGAGAGAGAAGGGCGAAGCCAAAGTTTGTTTGCTATATGGAGTTATGATGGGAAATTAGTATATGAAAACATTGTTGAAGCCACAGAGGAGTTTGACGAAAAATATATCATTGGGGTTGGAGGATTTGGAAGTGTTTACAAAGCTGAATTATCCACAGGCCAAGTTGTGGCTGTGAAGAAGTTTCATTCAGTACCAGACAGAGATCAGTGTCATCAAAAAGCATTTATAAGTGAGATTCGAGCCTTGACAGAAACTAGGCATCATAATATCATCAAGCTATATGGGTTTTGCTGGCATTCAAAGTTCTCCTTTTTGGTTTATGAATTCTTGGAAGGGGGAAGCTTGGATAAGATACTAAGTGATGAGACACAAGCAATTGCATTGGATTGGAATAAGAGAATTAAAGTTGTTAGAGGTGTGGCTAATGCTTCATACTATCTTCATCATGGATGCTCACCTCCGATAGTTCATCGTGACATATCAAGCAAAAATGTTATTTTAGACTCAGATTATGAGGCTCACATCTCTGACTTCGGGACAGCCAAACTTTTGTATCCAGATTCTAACAATTGGACCTCATTTGTTGGTACCTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTGACCGAGAAATGTGATGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCTGCTACTACTAATACACCAATAATAGTTACTCATGATTTTGATTTGAAGGAAGTGTTAGACCAAAGGCTACTTTATCCTCAAGGTTTGATAGCTGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATAAAAATCCACGTACTCGACCATCCATGGAGCAAGTATGCAATGAGTTTGCGGTGCCAATATCACGTGTTTTTAGTTCCATTCCATAG 2832 0.3736 MVFSEKLTFWWVLLVGYLMLSPSHVSSFMTSSSNGEANALLKWKASLDNQSQALLSSWKHNSSRPCKWIGITCNEFNSISNISLPDIGLRGMLNSLNFSSFPNLQSLELGGNQFIGSIPHEIGMLKELVLLNLSSNSLSGNIPTTLGNMTNLHDLSLSSNQISGSIPWEIGKLYSIETLDLSENKILGSVPPSIWNLVNLSLLNFYQNNLSGFIPFRIGNLTRLSMLSLGRNDLLGSVPSSIGNLTKLTYLNLCGNKLSGNLPLEMNSLRRMESLQIGENYFEGYFPQDICFGGLLVNITAHRNQFTGPIPRSLKNCSNLMRVRFESNQLTGNVTDAFGVYQHLTYIDLSYNALYGHLSPTWGQCHNLESLKISDNNLSGGIPPELSEATKLNQLDFSSNHLSGNIPKELSHLSLLSELMLDNNQLSKSIPIDIGLLTNLDQLSLANNHLNGSIPEQLGGLTKLWNLNLSGNKFFNLPSSLGKLQYLQFLDLSANSFCGGIPIMLRNLKQLEKLNLSHNNFSGTIPSFFDDLKSLTMIDISHNKLEGSLPNNFAFRNASMETLKDNKGLCGNVSGLPICPTRSYSPMHLKRNKWLTYALSLGFGSVFLAIVLMGILYIVCHRKASQAKSQEREGRSQSLFAIWSYDGKLVYENIVEATEEFDEKYIIGVGGFGSVYKAELSTGQVVAVKKFHSVPDRDQCHQKAFISEIRALTETRHHNIIKLYGFCWHSKFSFLVYEFLEGGSLDKILSDETQAIALDWNKRIKVVRGVANASYYLHHGCSPPIVHRDISSKNVILDSDYEAHISDFGTAKLLYPDSNNWTSFVGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIMSATTNTPIIVTHDFDLKEVLDQRLLYPQGLIAEKVMLIARIAFTCLNKNPRTRPSMEQVCNEFAVPISRVFSSIP 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3107 943 SUPERFAMILY Protein kinase-like (PK-like) 641 929 IPR011009 -
Acco06g3107 943 ProSitePatterns Protein kinases ATP-binding region signature. 667 690 IPR017441 GO:0005524
Acco06g3107 943 ProSiteProfiles Protein kinase domain profile. 661 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g3107 943 SUPERFAMILY RNI-like 266 562 - -
Acco06g3107 943 Gene3D Ribonuclease Inhibitor 190 295 IPR032675 -
Acco06g3107 943 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 290 583 - -
Acco06g3107 943 Pfam Leucine rich repeat 487 545 IPR001611 GO:0005515
Acco06g3107 943 Pfam Leucine rich repeat 102 162 IPR001611 GO:0005515
Acco06g3107 943 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Acco06g3107 943 ProSitePatterns Tyrosine protein kinases specific active-site signature. 785 797 IPR008266 GO:0004672|GO:0006468
Acco06g3107 943 SUPERFAMILY L domain-like 35 330 - -
Acco06g3107 943 Gene3D Ribonuclease Inhibitor 314 585 IPR032675 -
Acco06g3107 943 SMART LRR_typ_2 101 124 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 532 557 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 437 460 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 245 269 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 461 484 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 508 531 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 125 149 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 173 197 IPR003591 -
Acco06g3107 943 SMART LRR_typ_2 413 436 IPR003591 -
Acco06g3107 943 FunFam MDIS1-interacting receptor like kinase 2 740 937 - -
Acco06g3107 943 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Acco06g3107 943 PANTHER LEUCINE RICH REPEAT KINASE 2 218 934 - -
Acco06g3107 943 Gene3D Phosphorylase Kinase; domain 1 619 739 - -
Acco06g3107 943 FunFam MDIS1-interacting receptor like kinase 2 isoform A 190 289 - -
Acco06g3107 943 FunFam Leucine-rich repeat receptor protein kinase MSP1 623 739 - -
Acco06g3107 943 Pfam Protein kinase domain 663 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g3107 943 Gene3D Transferase(Phosphotransferase) domain 1 740 936 - -
Acco06g3107 943 FunFam Nuclear pore complex protein NUP107 33 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3107 Acco-ChrAcco06 41155828 41158802 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3107 1 833 Receptor kinase-like Gene Family AT4G08850 40.957 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g3107 Pkinase 1.4e-45 CL0016