Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3104 ATGGCATTCCTCTTCGGAAAACCTCAATTTTCGGAGAAGCTTACACTTTGGTGGGTACTTTTAGTTGGCTATTTAATATTGTTCCCATCTCATGTTTCCTCTTTCATTACTTCACCAAATAGTGAAACAAACACTTTGCTAAAGTGGAAGGCCAGCCTTGACAACCAAAGCCAAACTTTGTTATCAACATGGAAAGATAATAGAAGTCATCCTTGCAATTGGGTTGGAATTGAATGCAATGAGTTCAACTCCGTTTTCAATATATCTCTTGCAGATCTTGGGTTAAGAGATTCTAACAATTGGACCTCATTTGCCGGTACCTTTGGCTATGCTGCTCCAGAACTTGCGTATACAATGGAAGTGACCGAGAAATGTGATGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCTTCTATATATGCACCAACAATAGTTGCTCATGATTTGGAATTGAAGAAAGTGTTAGACCAAAGGCTACCTTATCCTCAAGGTTCTGTGACTGAAAAGGTGATGTTGATTGCAAGAATTGCTTTTACTTGCTTGAATGAAAATCCACGTACTCGGCCCTCTATGGAGCAAGTATGCAATGAGCACTTGGAGTGA 639 0.3928 MAFLFGKPQFSEKLTLWWVLLVGYLILFPSHVSSFITSPNSETNTLLKWKASLDNQSQTLLSTWKDNRSHPCNWVGIECNEFNSVFNISLADLGLRDSNNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIMSSIYAPTIVAHDLELKKVLDQRLPYPQGSVTEKVMLIARIAFTCLNENPRTRPSMEQVCNEHLE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3104 212 Pfam Protein kinase domain 89 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g3104 212 SUPERFAMILY Protein kinase-like (PK-like) 86 209 IPR011009 -
Acco06g3104 212 Gene3D Transferase(Phosphotransferase) domain 1 44 212 - -
Acco06g3104 212 PANTHER LEUCINE RICH REPEAT KINASE 2 85 210 - -
Acco06g3104 212 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g3104 212 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3104 Acco-ChrAcco06 41080220 41083609 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3104 67 206 Receptor kinase-like Gene Family AT1G08590 31.034 5.90e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g3104 Pkinase 1.5e-11 CL0016