Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3101 ATGTTGCTAGCAATAGTTTTGATAGGAATTTCATATATTGTTTACCATCATAATGCACAGAAAGAGAAAACTCAAGAAATAGAAGGGCAAACTCAAAACTTGTTTGCTATATGGAGTTATGATGGGAAATTAGTATATGAAAACATTATTAAAGCAACAGAGGAGTTCAACGAAAAATATCTCATTGGGGTTGGAGGGTTTGGAAGCGTCTATAAAGCTGAATTGTCCACAGGTCAAGTTGTGGCTGTGAAGAAACTTCATTTTCTACCAGATAGGGATCAATGTCATCAAAAAGCATTTATGAGTGAGATTCGGGTCTTGACAGAAACTAGGCATCATAATATCATCAAGCTATATGGGTTTTGCTGGCATTCAAAGTTCTCCTTTTTGGTTTATGAATTCTTGGAAGGGGGCAGCTTGAATAAGATATTAAGTGATGAGATGCAAGCAACTGAATTGGATTGGAATAAGAGAATAAAAGTTGTTGAAGGTGTGGCAAATGCTTCATACTATCTTCATCATGGATGCTCACCTCCGATAGTTCATCGTGACATATCGAGCAAAAATATTATTTTAGACTCGGATTATGAAGCTCACATCTCTGACTTCGGGACGGCCAAGCTTTTGTATCCAGATTCTAACAATTGGACCTCATTTGCCGGTACCTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTAACCGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATAATGGGAAAGCATCCAAGAGATCTTCTAATGTCTTATATTGATGCACCAACGATAGTTGCTCGTGATCTAAATGTTAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCAAGACTTGGAGGCTGAGAAGGTGGTGTTGATTACAAGAATAGCTTTTACTTGCTTGAATGAAAATCCTCGTACTCGCCCATCCATGGTGCAAGTATGCAATGAGCTTGCGATGCCAAGATCACATGTTTGTGGTTCTATTCCATAG 1014 0.3856 MLLAIVLIGISYIVYHHNAQKEKTQEIEGQTQNLFAIWSYDGKLVYENIIKATEEFNEKYLIGVGGFGSVYKAELSTGQVVAVKKLHFLPDRDQCHQKAFMSEIRVLTETRHHNIIKLYGFCWHSKFSFLVYEFLEGGSLNKILSDEMQATELDWNKRIKVVEGVANASYYLHHGCSPPIVHRDISSKNIILDSDYEAHISDFGTAKLLYPDSNNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLLMSYIDAPTIVARDLNVKEVLDQRLPYPQDLEAEKVVLITRIAFTCLNENPRTRPSMVQVCNELAMPRSHVCGSIP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3101 337 Pfam Protein kinase domain 57 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g3101 337 ProSiteProfiles Protein kinase domain profile. 56 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g3101 337 SUPERFAMILY Protein kinase-like (PK-like) 39 325 IPR011009 -
Acco06g3101 337 PANTHER LEUCINE RICH REPEAT KINASE 2 4 329 - -
Acco06g3101 337 ProSitePatterns Tyrosine protein kinases specific active-site signature. 180 192 IPR008266 GO:0004672|GO:0006468
Acco06g3101 337 Gene3D Transferase(Phosphotransferase) domain 1 135 332 - -
Acco06g3101 337 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Acco06g3101 337 FunFam MDIS1-interacting receptor like kinase 2 135 331 - -
Acco06g3101 337 PIRSF ILK 19 333 - -
Acco06g3101 337 Gene3D Phosphorylase Kinase; domain 1 14 134 - -
Acco06g3101 337 FunFam Leucine-rich repeat receptor protein kinase MSP1 19 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3101 Acco-ChrAcco06 40808970 40810128 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3101 21 228 Receptor kinase-like Gene Family AT4G08850 54.630 5.45e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g3101 Pkinase 6.2e-47 CL0016