Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3099 ATGTCGCCTAGTGTCAGAGACCTACAGTTAACTCCTCGTGCTGGTGGCCGTGAAACCTCTTCCGCCGACCTCGAGGATGTCCGGCTCTTGGACTCCTATGACAAAACGGATTGTTCATTTGGATCTGAAGACGGAATCAAACGGATTCAGGTCAGAGTCTCTGGCATGACCTGTGCTGCCTGCTCCAATTCCGTTGAAGCAGCTCTCAAGGCCATTGATGGCATGGTCAGTGCCTCCGTTGCTCTGCTTCAGAATAAGGCTGATGTCGTTTTCAACTCAAGTCTGGTCAAGGACGAAGACATTAAAAATGCAATTGAAGATGCAGGATTTGAAGCAGACATGTTACCCGAGACCAGTACAGTTGGACCAAAACTGCAACAAACCCTGGTTGGACAGTTCACAATTGGTGGTATGACATGTGCAGCTTGTGTAAATTCTGTTGAGGGTATTTTGAGGAATCTTACTGGGGTCAAAAGTGCTGTTGTAGCTTTGGCAACTTCCTTGGGGGAAGTTGAATATGATCCAGCTATAATTAGTAAAGATGATATAATCAATTCAATTGAAGATGCTGGTTTTGAAGCTTCATTTGTACAGAGTAGTGAGCAAGATAAAATAATTTTAGGGATTGTTGGTTTGTACAGCCTTATTGATGCACAAGTTTTAGAAGCCATGCTCAGCAGTATGAAAGGAGTAAAACAGTTTCATTTTGATCAGATATCATGTGAACTGGAAGTTCATTTTGATCCTGAAGTTCTCAATTCTAGATCCTTAGTTGATGGGATTGAAGGAGGAAGCAATGAAAAGTTTAAACTACATGTTAGGAGCCCGTATGCAAGAATGGTCTCAAAGGATGTTGAAGAGATCACAGCTATGTTTCGACTTTTTACCTCAAGCCTGTTTCTAAGTATTCCCCTTTTTCTAATTGCTGTAGTTTGTCCTCATATTCCAATGATATACTCCTTACTACTCTGGAGATGTGGGCCTTTCCTTATGGATGACTGGCTTAAGTGGGCATTAACTAGTATAATTCAATTTGGTATTGGAAAGCGCTTCTACATTGCAGCTGGCAGAGCTCTTAAGAATGGTTCAACTAACATGGATGTGTTGGTTGCTTTGGGAACTACAGCTTCTTACGTCTATTCTGTTTGTGCTCTTCTTTATGGTGCCCTTACTGGATTTTGGTCTCCGACTTATTTTGAAACAAGTGCCATGCTCATCACATTTGTATTGTTTGGGAAGTATTTGGAATGCCTTGCAAAAGGGAAGACATCAGATGCCATCAAGAAGTTAGTAGAACTGGCCCCTGCGACAGCCTTGTTGGTAGTGAAAGATAAAGGTGATAAACCTATTGAAGAGAGGGAAATAGATTCATTGCTCATTCAGCCTGGCGACACATTAAAGGTTCTTCCTGGTACTAAGATTCCTGCTGATGGTACCGTTACATGGGGCTCAAGTTATGTAAATGAGAGTATGGTAACTGGAGAAGCTGTGCCTGTTTCAAAGGAAGTTAATGCATCTGTTATTGGAGGTACCATAAATTTACACGGTGTCCTTCACATTCAAGCCACCAAAGTAGGAGCTGATACAGTTTTGAGTCAGATAATTAGTTTGGTAGAGACAGCCCAGATGTCCAAAGCCCCTATTCAGAAATTTGCTGATTATGTAGCAAGCATTTTTGTCCCTACAGTTGTTTCTTTGGCATTATTGACATTATTGGGTTGGTATGTTGCTGGAGCTCTTGGAGCTTACCCTGATGAATGGCTGCCGAAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTGCAATATCTGTGGTGGTGATTGCATGTCCCTGTGCACTTGGCTTGGCAACACCAACTGCTGTCATGGTAGCAACAGGGGTTGGGGCTAAGAATGGGGTGTTAATTAAAGGAGGGGATGCCTTGGAAAAGGCTCAGATGGTGAAGCACATAATATTTGACAAAACAGGTACTTTAACTCAGGGAAAAGCCACTGTTATGACTGCCAAGGTATTCACAGGGATGGAGCGGGGAGAGTTTCTTACTCTGGTGGCTTCTGCAGAGGCTAGCAGTGAACATCCACTGGGGAAAGCAATAGTAGAGTATGCACGCCATTTTCATTTCTTTGATGAGTCATCTGCAGCCACTGGTACCAAAGATGCTGCCAAGGAGATAAAAGCTGGATGGCTTTATGATGTCTCAGACTTCTCTGCTCTTCCAGGAAGGGGTGTCCAGTGTCTTTTACACGGGAAGCTTATTCTGGTTGGTAACAGGAAGCTAATGGGGGAAAGTGGAATAGATATCCCAACCCAAGTGGAAAATTTTGTGGTGGAGCTGGAAGAAAGTGCAAAGACCGGAGTACTTGTTGCATATGGTGATGAATTAATTGGCGTTTTAGGGGTTGCAGATCCGCTAAAAAGAGAAGCTTCTGTGGTTATAGAAGGCCTCCGGAAAATGGGCATCAGGCCGGTCATGGTTACAGGAGATAACTTGAGAACTGCTCGGGCTGTTGCCAAGGAGGTTGGAATAGAAGATGTGAGAGCAGAGGTGATGCCAGCAGGGAAGGCTGAGGTTGTTCGTTCATTCCAAAAAGATGGTAGCATAGTGGCAATGGTGGGTGATGGGATCAACGACTCTCCAGCATTAGCTGCTGCAGATGTTGGCATGGCAATCGGGGCTGGCACGGACATCGCAATAGAAGCTGCGGACTATGTACTGATGAGAAACAATCTAGAAGATGTGATCACAGCCATTGATCTTTCGAGGAAGACCTTTTTTCGGATTCGATTGAACTATGTATTTGCAATGGCTTATAATGTCGTTGCTATACCAGCAGCTGCTGGGGTTCTCTACCCTTCATTAGGGATCAAGCTGCCTCCTTGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTAAGTGTTGTTTGCTCTTCTTTGCTTCTTAGAAGATATAGAAGACCCAGACTTACTACAATACTTGAAATAGTTGTAGAATAA 2997 0.4364 MSPSVRDLQLTPRAGGRETSSADLEDVRLLDSYDKTDCSFGSEDGIKRIQVRVSGMTCAACSNSVEAALKAIDGMVSASVALLQNKADVVFNSSLVKDEDIKNAIEDAGFEADMLPETSTVGPKLQQTLVGQFTIGGMTCAACVNSVEGILRNLTGVKSAVVALATSLGEVEYDPAIISKDDIINSIEDAGFEASFVQSSEQDKIILGIVGLYSLIDAQVLEAMLSSMKGVKQFHFDQISCELEVHFDPEVLNSRSLVDGIEGGSNEKFKLHVRSPYARMVSKDVEEITAMFRLFTSSLFLSIPLFLIAVVCPHIPMIYSLLLWRCGPFLMDDWLKWALTSIIQFGIGKRFYIAAGRALKNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLFGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGDKPIEEREIDSLLIQPGDTLKVLPGTKIPADGTVTWGSSYVNESMVTGEAVPVSKEVNASVIGGTINLHGVLHIQATKVGADTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVSLALLTLLGWYVAGALGAYPDEWLPKNGNHFVFALMFAISVVVIACPCALGLATPTAVMVATGVGAKNGVLIKGGDALEKAQMVKHIIFDKTGTLTQGKATVMTAKVFTGMERGEFLTLVASAEASSEHPLGKAIVEYARHFHFFDESSAATGTKDAAKEIKAGWLYDVSDFSALPGRGVQCLLHGKLILVGNRKLMGESGIDIPTQVENFVVELEESAKTGVLVAYGDELIGVLGVADPLKREASVVIEGLRKMGIRPVMVTGDNLRTARAVAKEVGIEDVRAEVMPAGKAEVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFFRIRLNYVFAMAYNVVAIPAAAGVLYPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRRPRLTTILEIVVE 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3099 998 SUPERFAMILY HMA, heavy metal-associated domain 129 200 IPR036163 GO:0046872
Acco06g3099 998 ProSitePatterns E1-E2 ATPases phosphorylation site. 654 660 IPR018303 -
Acco06g3099 998 FunFam Copper-exporting P-type ATPase A 46 115 - -
Acco06g3099 998 FunFam Copper-exporting P-type ATPase A 127 197 - -
Acco06g3099 998 Gene3D - 619 929 IPR023214 -
Acco06g3099 998 FunFam Copper-exporting P-type ATPase 752 803 - -
Acco06g3099 998 SUPERFAMILY Calcium ATPase, transduction domain A 452 538 IPR008250 -
Acco06g3099 998 SUPERFAMILY HMA, heavy metal-associated domain 43 115 IPR036163 GO:0046872
Acco06g3099 998 ProSitePatterns Heavy-metal-associated domain. 135 164 IPR017969 GO:0046872
Acco06g3099 998 SFLD C1.7: P-type atpase like 634 924 - -
Acco06g3099 998 CDD HMA 50 112 IPR006121 GO:0046872
Acco06g3099 998 SFLD p-type atpase 634 924 IPR044492 -
Acco06g3099 998 Pfam E1-E2 ATPase 435 632 - -
Acco06g3099 998 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Acco06g3099 998 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Acco06g3099 998 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Acco06g3099 998 NCBIfam heavy metal translocating P-type ATPase 366 981 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco06g3099 998 SUPERFAMILY Calcium ATPase, transmembrane domain M 386 946 IPR023298 -
Acco06g3099 998 FunFam Copper-transporting ATPase 1, putative 420 542 - -
Acco06g3099 998 ProSitePatterns Heavy-metal-associated domain. 53 83 IPR017969 GO:0046872
Acco06g3099 998 Gene3D - 130 196 - -
Acco06g3099 998 NCBIfam copper ion binding protein 132 194 IPR006122 GO:0005507
Acco06g3099 998 NCBIfam copper ion binding protein 49 112 IPR006122 GO:0005507
Acco06g3099 998 MobiDBLite consensus disorder prediction 1 22 - -
Acco06g3099 998 Gene3D - 420 542 - -
Acco06g3099 998 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 42 993 - -
Acco06g3099 998 Pfam haloacid dehalogenase-like hydrolase 648 886 - -
Acco06g3099 998 CDD HMA 132 195 IPR006121 GO:0046872
Acco06g3099 998 ProSiteProfiles Heavy-metal-associated domain profile. 129 195 IPR006121 GO:0046872
Acco06g3099 998 CDD P-type_ATPase_Cu-like 293 968 - -
Acco06g3099 998 FunFam Probable copper-transporting ATPase HMA5 775 929 - -
Acco06g3099 998 Gene3D - 751 803 IPR023299 GO:0000166
Acco06g3099 998 Gene3D - 659 750 IPR023299 GO:0000166
Acco06g3099 998 FunFam Copper-transporting ATPase RAN1 659 751 - -
Acco06g3099 998 Pfam Heavy-metal-associated domain 133 193 IPR006121 GO:0046872
Acco06g3099 998 Pfam Heavy-metal-associated domain 51 111 IPR006121 GO:0046872
Acco06g3099 998 ProSiteProfiles Heavy-metal-associated domain profile. 47 113 IPR006121 GO:0046872
Acco06g3099 998 SUPERFAMILY HAD-like 651 978 IPR036412 -
Acco06g3099 998 PRINTS P-type cation-transporting ATPase superfamily signature 797 808 - -
Acco06g3099 998 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Acco06g3099 998 PRINTS P-type cation-transporting ATPase superfamily signature 895 907 - -
Acco06g3099 998 PRINTS P-type cation-transporting ATPase superfamily signature 819 829 - -
Acco06g3099 998 PRINTS P-type cation-transporting ATPase superfamily signature 652 666 - -
Acco06g3099 998 PRINTS P-type cation-transporting ATPase superfamily signature 872 891 - -
Acco06g3099 998 NCBIfam HAD-IC family P-type ATPase 405 674 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g3099 998 NCBIfam HAD-IC family P-type ATPase 772 952 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g3099 998 Gene3D - 46 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3099 Acco-ChrAcco06 40756949 40763327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3099 1 998 Primary Pumps ATPases AT5G44790 74.133 0.0 1498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g3099 06 40756949 40763327 Acco06g3099 06 40756949 40763327 ECH