Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3095 ATGATCTTCGCAGCAGCCCTTATGCATGAAGATGGCCCTTTTTCTTTCTCCAAGAAGAGGCTGATAGTATCAGATTTTGGATATCAAGATCTACATCCACATGCATATGCAGGACGTTTCAGTGATGCACCATTGCCTTCGCATCTGGATGTAGAAAGGGATACTGGTGATATTCCCTCTTCTTCCAGTCTTGATGATAGAGTTGATTCAGATTCTGAATTGGATATGAGCTGCAAGACAAATATTAAAAGTGTTGATATTCCTGTATGCTTTACATCAGGAAATATTTCATTCCAGGATCAAAGCCATCCTGGCTATATGCAGCCTGCTTTTGTTAGTGCATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATCCAGGAGCAACTATATGAAGGATTAACTACTGGTTTCTTGCCAGCTGAGCTTCCTGTGTATCCTGTGATTAATGGTGCATTAATGAACCCTGTACCATTGAATTACTTCAAGCAATTTCCTGATCATGTTTCCACTGGGTTCGTATATCTGAGCATGAGTAGCTCAGTCATAACCGTGCCTACAGGTTGCTCCACATCATCTGGTAAGGATATGGCATCATATAGACAAGGATCCTTTGAAGATGCTCCTCCTCTAGCTGTCAACCTTGATTCACAGACAGTTTTTCAGTCGCAAGTCAACTACACCAGTAAGGAATTCTTAACATCAAACTCAAAGTTACATGAAGAATGCTGTTGGCTTTATGAGGATGAGAAAGGAATAAAGCATGGACCACATTCCATTTTGGAATTAATTTCCTGGCATCATTATGGACATCTCCAAGATTCGTCAGTGATTCATCATACTGAAAATAAGTGTAGCCCCTTTGTCCTTTTGTCTGCTGTAAATGCATGGAAAACAGGAACGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGACAGGGCTTGTAGTGATACCAGAAGCTTCATCAATGAAGTATCTGTAGACATTTCTTCTCAGCTGCATTCAGGAGTCATGAAAACTGCCCGTAGGGTGGTGTTGGATGAGATTATCAGTAACACCATTGCAGAATTTGTTACGGAAAAGAAATCTCGGAGGCATAAGCATGACTCAGTTGATCAGCCTTCTGAGACTAGCTTGTTAGGCTGCAGAAGGGCTGAGACTGCTGTGGAGATGAGAAAAGGTACTGTTCTTACAAGTGAGCCTTCATCTTCCCAAATGCTTGATGATCAGTCGTCTTGCAAAGTTTCCAGAATGTCTCCAACAAGCACTAAATCGGTTGGAAGCATTGAAAACTTTTGGTGGTCGTATGCTGTTGTTCGAAAAGTACTTAATGATTATTGCATGCAAGTCATGTGGAATGCTGTGATTTATGACTCTATGGCAGAGTACATACATAACTGGAGAAAGAGAAAACTATGGTCTATTTGTCCTAAGCCTCAATTATCTATTAAAGGATGTAAAGATTATGGTGGAATTATCACATCAGCAGAAGCCTTGCTTCCCAGGCCAGGTTCTTCTGAACATGATGCTGTTCAGCATCCTCATTGTAGAGTGGTGGCAATGGAGGGGGATTATCTTAGTCAATCATTTTCTATGTCTTCTGCTGTCTTGAAAGCAGGAAACATTTCAGAAAATGGAAGAGCATCATGTTCTGATAGTGATCATGGAGATTTGACATGCATTATTAAAAATATTGAGAATGAGCTTCATGCGATGTCAGAGGCATCTTTAACTGAATACATTAAAAGTTTAGTTGACAAGGAAGTGAAAAGATTATTTAATTGTCCCCAAGAAGACATTTTGAACAAGGATGCTGTCAGTGATGACATTTTTTCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTGACAATACGGTTGTTATGATAGAAGGCGATGGTCTTCAAGATTCTATATCTGGAAACCATATGTCTACTTTATTCTCAAGAGCATTCCAGGAGTTGCATGCCAATGTAGGTGATGTGGTTAATGAAAAGCAGATTGGTGACATCTTACCTCCTGGATGTGAAAAGAATTCAAAAACTATTCTCCCACAATACAATTATAAGTATCGACCTTCAAGATTAGTTGAAAATGTTCCTAAGATAACAAAATATGTCACAACAGCCCTATGCCGACAGAAGTTGCATTCTGAGGTTCTTGAAGAGTGGAAATCTTTGTTTCTTGATGCTGCATTCAATCAACTTTTTGCATCATTCTGCGCTACAAAGAAAGTCAGCCAGCTTGATGGTTGCATGGAAGGGAAAGTACAGAATTCATCTGAGGAACATTTGAACAATCCTGCTCTGGGAAGAATGAAGAAAATATCCAAAAAAATTTCTTCCGAAGATTCTCGGATGGTTGGGAAATATACAAATCATGGCAAGAAGCTGCCACAGAAAGAGTTAGGTTCTTCTCAAAAGATAGCTGCGCCTGTCAAAAAGCAAGTGGATAAGCAGAAGAAACGTGTTTCTGGGGATTTGGATGACTCTGCCAAAGGTGCAATATCTCCTGATAAAAATGCACAGACTAAGCTGATAAAAGGGAACAAGAATAAACAGCGTAATGGAAAGTCTCTTACTGTCAGTCCTAAAAGCAACTTGCAGATTAAAAAGTCATCTATAAATATTGCAACTAGTAAAAAATTATTGAAGCATTCACAGGAAGGTCAAGATGATGTCAAGGATGATGAGAAAAGTGACAGAGTGAAGATTTCAACTGTTGTAGAAAATAGTGTTGGCAAGAAAAAGGTAGTTGATAGCAATGGTCTTGATGGTGCCATTAATGGAAAATCCACTCGCTACTGCTCCAGGGAAACTCTCATCGCAACAAATAACGTTTCAAAACCAAAAAGGAAGCATGTAGCGGATGATTTGCCATCCTTACGTCCCTCAAAGGCCTTGAAAATTGCATATCATGGTTCAAAGGTTGGAGTTGGTGGACATGTGTCAAAGACGAAGTCTGCTAAATCCAAGCCATTGATATTATGTCCTAGATCTGTTGGATGTGCCAGGACTTCTATTGATGGGTGGGAATGGCATAAATGGTCTCTAAACGCAAGTTCTTCTGATAGAGCATGTGTTAGGGGAACGCTGTGTGGCCTAAAGAACTATATTCCATCTGATAGTAATCCAACTCATTGGTTAAATTGTAAGGGTCTTTCTGCACGGACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCAAGGAAAAAACGTTTACATTTTCAGAGAAGTAAAATACACGACTGGGGTATTGTTGCCTTGGAGTCAATAGAGGCAGAGGACTTCGTGGTTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATACGTGAACGTCAGTATGAAAAGATGGGAATTGGCAGCAGCTACTTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACGAAACGAGGTGGGATTGCAAGATTTATAAATCACTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCCAAGCGTCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAATTTCCCTTGGAGGAGAATAAGATTCCCTGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3699 0.3977 MIFAAALMHEDGPFSFSKKRLIVSDFGYQDLHPHAYAGRFSDAPLPSHLDVERDTGDIPSSSSLDDRVDSDSELDMSCKTNIKSVDIPVCFTSGNISFQDQSHPGYMQPAFVSAWMYVNENGQMCGPYIQEQLYEGLTTGFLPAELPVYPVINGALMNPVPLNYFKQFPDHVSTGFVYLSMSSSVITVPTGCSTSSGKDMASYRQGSFEDAPPLAVNLDSQTVFQSQVNYTSKEFLTSNSKLHEECCWLYEDEKGIKHGPHSILELISWHHYGHLQDSSVIHHTENKCSPFVLLSAVNAWKTGTFENICRSDSKSDRACSDTRSFINEVSVDISSQLHSGVMKTARRVVLDEIISNTIAEFVTEKKSRRHKHDSVDQPSETSLLGCRRAETAVEMRKGTVLTSEPSSSQMLDDQSSCKVSRMSPTSTKSVGSIENFWWSYAVVRKVLNDYCMQVMWNAVIYDSMAEYIHNWRKRKLWSICPKPQLSIKGCKDYGGIITSAEALLPRPGSSEHDAVQHPHCRVVAMEGDYLSQSFSMSSAVLKAGNISENGRASCSDSDHGDLTCIIKNIENELHAMSEASLTEYIKSLVDKEVKRLFNCPQEDILNKDAVSDDIFSEISCDKTSEEGILSDNTVVMIEGDGLQDSISGNHMSTLFSRAFQELHANVGDVVNEKQIGDILPPGCEKNSKTILPQYNYKYRPSRLVENVPKITKYVTTALCRQKLHSEVLEEWKSLFLDAAFNQLFASFCATKKVSQLDGCMEGKVQNSSEEHLNNPALGRMKKISKKISSEDSRMVGKYTNHGKKLPQKELGSSQKIAAPVKKQVDKQKKRVSGDLDDSAKGAISPDKNAQTKLIKGNKNKQRNGKSLTVSPKSNLQIKKSSINIATSKKLLKHSQEGQDDVKDDEKSDRVKISTVVENSVGKKKVVDSNGLDGAINGKSTRYCSRETLIATNNVSKPKRKHVADDLPSLRPSKALKIAYHGSKVGVGGHVSKTKSAKSKPLILCPRSVGCARTSIDGWEWHKWSLNASSSDRACVRGTLCGLKNYIPSDSNPTHWLNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLHFQRSKIHDWGIVALESIEAEDFVVEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKCRGSLN 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3095 1232 CDD SET_SETD1 1081 1228 IPR037841 GO:0042800|GO:0048188
Acco06g3095 1232 MobiDBLite consensus disorder prediction 403 424 - -
Acco06g3095 1232 MobiDBLite consensus disorder prediction 785 804 - -
Acco06g3095 1232 SUPERFAMILY SET domain 1089 1229 IPR046341 -
Acco06g3095 1232 MobiDBLite consensus disorder prediction 889 908 - -
Acco06g3095 1232 ProSiteProfiles Post-SET domain profile. 1216 1232 IPR003616 -
Acco06g3095 1232 Gene3D SET domain 1030 1232 IPR046341 -
Acco06g3095 1232 Pfam SET domain 1105 1209 IPR001214 GO:0005515
Acco06g3095 1232 ProSiteProfiles SET domain profile. 1093 1210 IPR001214 GO:0005515
Acco06g3095 1232 SMART set_7 1093 1216 IPR001214 GO:0005515
Acco06g3095 1232 SUPERFAMILY GYF domain 243 297 IPR035445 -
Acco06g3095 1232 SMART PostSET_3 1216 1232 IPR003616 -
Acco06g3095 1232 MobiDBLite consensus disorder prediction 821 836 - -
Acco06g3095 1232 MobiDBLite consensus disorder prediction 48 70 - -
Acco06g3095 1232 MobiDBLite consensus disorder prediction 892 908 - -
Acco06g3095 1232 Gene3D - 102 176 IPR035445 -
Acco06g3095 1232 Gene3D - 232 323 IPR035445 -
Acco06g3095 1232 MobiDBLite consensus disorder prediction 785 873 - -
Acco06g3095 1232 ProSiteProfiles GYF domain profile. 245 295 IPR003169 GO:0005515
Acco06g3095 1232 MobiDBLite consensus disorder prediction 850 873 - -
Acco06g3095 1232 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 808 1232 IPR044570 GO:0042800|GO:0051568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3095 Acco-ChrAcco06 40658497 40666318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3095 1092 1232 C2H2 Transcription Factor Family AT2G23740 37.423 1.08e-19 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco06g3095 SET 1.7e-21 No_clan