Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3081 ATGTCTAACCAAACTACTGGGCCATCGGTATTTGAAATTGATCAACATACAAATTTCGGACGTGAAATAATTTTGGCTGTGCTTCTTGATAGCCAAGGCGACCATGTTTCAGAAAGCGAATTTGACGAAATTTTTGAAGAATCATATTCAGAAGAAGATCAAGAAGAAGGGGAGGACGACGGCAATAATGACAATGAAGAAATAGAAGGCGACAATGGCAATAATCACCGGAAGTCAATAGAAAATTTAGAAAAGGTTAAGATTCAAGAGCCTTTAATGTGTTCGATATGTTTGGAGGAGATTACTCCCTCAAACAAAGAAGAAAAAGAAGGAGCCGATCAAATTCCTAAGCCTTGTGGTCATGTCTATCACCATAACTGCATCATCAAATGGCTCATCAACCACCATACTTGTCCTCTGTGTCGCTTCAAGATTACAGACTAA 444 0.3874 MSNQTTGPSVFEIDQHTNFGREIILAVLLDSQGDHVSESEFDEIFEESYSEEDQEEGEDDGNNDNEEIEGDNGNNHRKSIENLEKVKIQEPLMCSICLEEITPSNKEEKEGADQIPKPCGHVYHHNCIIKWLINHHTCPLCRFKITD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3081 147 ProSiteProfiles Zinc finger RING-type profile. 94 142 IPR001841 -
Acco06g3081 147 MobiDBLite consensus disorder prediction 40 67 - -
Acco06g3081 147 SUPERFAMILY RING/U-box 83 145 - -
Acco06g3081 147 SMART ring_2 94 141 IPR001841 -
Acco06g3081 147 Pfam Ring finger domain 93 142 IPR001841 -
Acco06g3081 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 146 IPR013083 -
Acco06g3081 147 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 43 144 - -
Acco06g3081 147 MobiDBLite consensus disorder prediction 36 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3081 Acco-ChrAcco06 40368295 40368738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3081 24 145 C3H Transcription Factor Family AT1G68070 29.600 3.27e-11 58.2