Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3020 ATGATTCAGAAGGACCCAATGCTTCTGAAGGAAGAAACTGAGAGAGATCCCCCATGTAGTTGTCATCTTGTTCTTCCCCTCGAGTTCCGTTTCTGCTCTCCTCGTCACCTTCCCTCATTCGCAGCTCTGCGAGATCTATACGAGACGTTGAACCGGCCACCAGAGTTGAAGAACTGGAATCTTGAAGATCCCTGTGGGGAATCTTGGATTGGAGTAGCATGTTCTGGGTCGTCAGTCATACACCTAAAAATTCCAAGATTGAATCTCACAGGACATCTTGGAAGCCAGCTCCATAATCTACAAAAATTGAAGATGCTTGATGTTGGCTCCAATAACATAGGTGGGGAAATACCATCCAGCTTACCCCCGAATGCCACACATATGAATCTGAGCTACAATTTGCTATCTGGACCCATTGGCAATGTTTTTACAGGCCTGGATAATCTCATAAAGATGGACCTTTCATACAACGATTTCACAGGAGATCTGCCCAGTTCATTTGGTTGCTTGAAAAACCTTAATAGATTGTTCTTGCAAAATAATAACTTCACTGGATCAGTCGCATATCTGGCTGACCTCCCCATTACAAATTTGATCGGAGGTAATAAATTCCATGCAGAAGGCAATTCTCCTCCATGGGATTTTCCTTTGGACAAAACACCAGTTTTATACAACATTAGTCGCCCGCCCATGACTCAAGCAAATACTATCGAGAACCATTCCTCTCACAAAGTAAGTGCGCACAAGAAGAAACTTGTGAGTGCCGGAGAAGTAGCTTTTATGGTTGGTGGGGGAACGCTATTAGTTACAGAAAACTATCCTATCCCGCCATTTAATTCTGCATCCCTGTTGCCTCCAAGGCGATTACCTTCCCTGCGCCAATACAGAGCAGAGAACATGCCAAGAAGAAGTTTTCCCACAACACGCAGATTCTCCGGAAGGGTAAAAGTTTACTCCGTGGGAGAGCTTCAGGTGGCTACAGACAGCTTCAGTGAAGACAATTTTCTGGGAGAGGGATCTATGGGTTCTGCTTACAGAGCTGTGTTTCCAAATGGCCGAGTACGATCTTAA 1071 0.4482 MIQKDPMLLKEETERDPPCSCHLVLPLEFRFCSPRHLPSFAALRDLYETLNRPPELKNWNLEDPCGESWIGVACSGSSVIHLKIPRLNLTGHLGSQLHNLQKLKMLDVGSNNIGGEIPSSLPPNATHMNLSYNLLSGPIGNVFTGLDNLIKMDLSYNDFTGDLPSSFGCLKNLNRLFLQNNNFTGSVAYLADLPITNLIGGNKFHAEGNSPPWDFPLDKTPVLYNISRPPMTQANTIENHSSHKVSAHKKKLVSAGEVAFMVGGGTLLVTENYPIPPFNSASLLPPRRLPSLRQYRAENMPRRSFPTTRRFSGRVKVYSVGELQVATDSFSEDNFLGEGSMGSAYRAVFPNGRVRS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3020 356 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Acco06g3020 356 Gene3D Ribonuclease Inhibitor 39 232 IPR032675 -
Acco06g3020 356 Gene3D Phosphorylase Kinase; domain 1 293 355 - -
Acco06g3020 356 Pfam Leucine rich repeat N-terminal domain 41 75 IPR013210 -
Acco06g3020 356 SUPERFAMILY L domain-like 53 193 - -
Acco06g3020 356 PANTHER OS05G0588300 PROTEIN 41 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3020 Acco-ChrAcco06 38436781 38440391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3020 42 353 Strubbelig Receptor Gene Family AT5G06820 38.177 6.55e-76 246