Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g3019 ATGAGGGGCCTGTCTTTACCCGAAGAGGAAACGTTTTTGGATGCCGTTTCCATCGCTTCCCGTCTGAGGCACCCCAACATCGTTGCGCTTAATGGCTATTGTATGGAGCACGGTCAGCGTCTTCTTGTTTACGATTATGTTAGAAACTTAACTCTGCACGATGCTCTTCACAGTGACGCATTCACGCCTTTATCTTGGCCCCTCCGTCTCCGTATTGCCCTTGGTGTTGCTCAGGCTCTGGATTATTTGCACTCGACGTTCTCCCCTCCTGTAGCACACGGCAAATTGACCGCTGCCAATATCCTTCTCGACGAAAACATGATGCCTCGTGTCTGTGACTGTGGCCTATCTATTTTGAGACCGCTAATGAGCTACATAGTCAAAGGTTCTGGACTTGCAGCTGAAGACGCAGGCTACATTGCACCGGACCACGGCCAACCAGGAATTAGCAACCCAAAGAATGACGTTTATGCCTTTGGGGTGTTACTTCTGGAATTATTAACGGGAAGGACACCTTACGAAGAGTATGTTCTTCTGCAGAGTTCGAGGCCATGGGCGGAAAAATACCTGGGAAGATGGGCATCATCGAGGCTTCATGACAATGAGAGCTTGGAACAGATGGTGGATCCAGGAATTAAAGGAAGTGTTTCAGCCAAAGCCCTCTCTCGTTATGCTGATATCATCTCGCTCTGCATACAGCCCGTGAAGGAATTTCGACCAATAATGTCGGCGGTTGTTGACTCTCTTAAAATCTGTTCACAAAAGCTTACCATGGACAAACCCACCGCCACCAGTGGAAAAATTACTGACTTGGATCCACTTGACAGGTCTTTCCATTCAACCATCACCTGCTTTCCTGGTTCCCCCACTTTTACCTACGTATCCGCCTGA 891 0.486 MRGLSLPEEETFLDAVSIASRLRHPNIVALNGYCMEHGQRLLVYDYVRNLTLHDALHSDAFTPLSWPLRLRIALGVAQALDYLHSTFSPPVAHGKLTAANILLDENMMPRVCDCGLSILRPLMSYIVKGSGLAAEDAGYIAPDHGQPGISNPKNDVYAFGVLLLELLTGRTPYEEYVLLQSSRPWAEKYLGRWASSRLHDNESLEQMVDPGIKGSVSAKALSRYADIISLCIQPVKEFRPIMSAVVDSLKICSQKLTMDKPTATSGKITDLDPLDRSFHSTITCFPGSPTFTYVSA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g3019 296 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g3019 296 SUPERFAMILY Protein kinase-like (PK-like) 8 258 IPR011009 -
Acco06g3019 296 Gene3D Transferase(Phosphotransferase) domain 1 49 269 - -
Acco06g3019 296 Gene3D Phosphorylase Kinase; domain 1 3 48 - -
Acco06g3019 296 PANTHER OS01G0253100 PROTEIN 8 253 - -
Acco06g3019 296 Pfam Protein tyrosine and serine/threonine kinase 8 249 IPR001245 GO:0004672|GO:0006468
Acco06g3019 296 FunFam Leucine-rich repeat receptor-like protein kinase 47 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g3019 Acco-ChrAcco06 38435490 38436686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g3019 1 296 Strubbelig Receptor Gene Family AT5G06820 55.034 1.25e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Acco06g3019 PK_Tyr_Ser-Thr 1.3e-29 CL0016