LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g2856	ATGGAAATAGACCCGACACAAGTCTCTCGCCTGAAAGGAGGCTGGGAAAGAGAGAGGGGCATACTCACACTGCAGACTCCCTCCTTTTTCGGCACCGAACTTCGCTTCGAACTCTTAGCTTGTTTCATGGATCAGTACGAGAAAGTTGAGAAGATTGGTGAAGGTACCTATGGTGTGGTTTACAAGGCTCGTGATCGGGTCACTAATGAGACCATAGCATTGAAGAAAATTCGATTGGAGCAGGAAGATGAGGGAGTGCCTAGCACTGCGATTCGAGAGATTTCTCTCTTGAAAGAAATGCAGCATAGGAATATTGTTAGGTTACAGGATGTAGTACACAGTGAGAAGCGTTTGTATCTGGTTTTTGAGTACCTGGACTTAGATCTGAAGAAGCACATGGATTCATCTCCTGATTTTGCAAAAGATTATCGACAAATAAAAATGTTTCTGTATCAAATTCTGTGTGGTATTGCTTACTGTCATTCGCATAGAGTTCTCCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGCAGTAATTCACTAAAGCTTGCAGATTTCGGATTGGCCAGGGCATTTGGCATTCCTGTCAGGACATTCACACATGAGGTGGTGACACTGTGGTACAGAGCTCCAGAAATATTGCTTGGATCTCGCCAGTATTCTACCCCAGTGGATGTTTGGTCTGTGGGCTGTATATTTGCAGAGATGGTAAATCAGCGACCACTATTTCCTGGAGACTCTGAGATTGACGAATTGTTTAAAATATTCAGAATCATGGGCACACCAACTGAGGATTCGTGGCCTGGAGTGACTTCATTGCCTGATTTTAAATCATCCTTTCCCAAGTGGCCTCCAAAGGACCTGGCAACTGTTGTTCCAAATCTTGAGCCAGCTGGCATTGATCTTCTTTCTAGCATGCTTTGCTTGGATCCCAGCAGAAGAATTACAGCCAGGAACGCCCTTGAGCATGAGTACTTCAAAGACATTAAGTTTGTACCCTGA	1011	0.4431	MEIDPTQVSRLKGGWERERGILTLQTPSFFGTELRFELLACFMDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKDYRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRSNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPTEDSWPGVTSLPDFKSSFPKWPPKDLATVVPNLEPAGIDLLSSMLCLDPSRRITARNALEHEYFKDIKFVP	336

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g2856	336	FunFam	Cell division control protein 2	43	126	-	-
	Acco06g2856	336	ProSiteProfiles	Protein kinase domain profile.	46	329	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g2856	336	SMART	serkin_6	46	329	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g2856	336	Gene3D	Transferase(Phosphotransferase) domain 1	128	334	-	-
	Acco06g2856	336	Gene3D	Phosphorylase Kinase; domain 1	43	126	-	-
	Acco06g2856	336	SUPERFAMILY	Protein kinase-like (PK-like)	40	332	IPR011009	-
	Acco06g2856	336	Pfam	Protein kinase domain	46	329	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g2856	336	FunFam	Cell division control protein 2 homolog	128	334	-	-
	Acco06g2856	336	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	165	177	IPR008271	GO:0004672\|GO:0006468
	Acco06g2856	336	CDD	STKc_CDK1_CdkB_like	46	329	-	-
	Acco06g2856	336	ProSitePatterns	Protein kinases ATP-binding region signature.	52	75	IPR017441	GO:0005524
	Acco06g2856	336	PANTHER	CELL DIVISION PROTEIN KINASE	43	329	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g2856	Acco-ChrAcco06	33268735	33280316	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g2856	43	336	Core Cell Cycle Gene Families	AT3G48750	85.714	0.0	533

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-Pl	Acco06g2856		Pkinase	2.1e-80	CL0016