Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2852 ATGGTACAAAAAATTGGGACTCGACTCTTTGTGAGCAGACTGTCATTCTACACAACAGTTAGCCACCTCAGAAATCTGTTTTCTCCTTTTGGAAAAATTACCGAAGCTTGTCTAGTGAAGGACCCAGAAACTCAAAGGCCTAAAGGATTTGGGTTTGTCTCATATGAGTCAGAAATTGAAGCAGAGAGGGCTATGAATGCCATGAATGCCAGGATAATTGAGGGAAGGCTGATTTTTGTAGAACCTGCAAAAGCCACAAGACCTAAAGAAGATAGTGCTTCTTGA 285 0.414 MVQKIGTRLFVSRLSFYTTVSHLRNLFSPFGKITEACLVKDPETQRPKGFGFVSYESEIEAERAMNAMNARIIEGRLIFVEPAKATRPKEDSAS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2852 94 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Acco06g2852 94 SUPERFAMILY RNA-binding domain, RBD 7 88 IPR035979 GO:0003676
Acco06g2852 94 Gene3D - 3 94 IPR012677 -
Acco06g2852 94 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Acco06g2852 94 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 8 85 - -
Acco06g2852 94 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 88 - -
Acco06g2852 94 SMART rrm1_1 8 81 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2852 Acco-ChrAcco06 33192625 33199026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2852 7 91 Eukaryotic Initiation Factors Gene Family AT4G34110 35.294 1.62e-09 51.2