Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2849 ATGTGCAGCAGCATCCTTAGCTCAATCATGGACAACAATTATCATCAGGGCGATTTAACTGATATATTCCGTGCAAGTGGCGGCGGCGGAGGTGGAGGTGGAGGTGGTGGTGGTTTACATGGTACTTCTTCTTCTTCAACATCTGAATTAGCTCCCCATGATCTCTCTTCTTCTTCATCGGAAAGTTGGCACCATCACCACCACCATCAGCACCAACACCAGCAGCAACACCACCAGATGAATTTCTGTTCTGTAATGATGGAAGATTCTCTGAGAGCCGCCAATTTCTTCGGCGATCCCTTCTCGAGCATTCGAGATCCCTTTCTTCAAGACCTTGAATTCCACTTACCTTCTTACTTCAGTTCTGCTCCAAATAATTCTGTCATAGAAGGTGCATCTCCTGGTTTTTCTGCTACTTCTTCTGTTGTTTTGTCTCATCATGATAATATGAGAATTAGGCCTCCTCCTTTAGCATCAGGTAACAACACCACCACCATATTCTCCAACCTGATTCAGATCTCTCCCAACGCTGCCGTGGCCAAGTTTCCGGTTTCGCTGTGCGATTCTCCTCCGGTGAATATGGCCGCCGTAAATTCTTCGTCTTCATCGTCAAGGGGAATTGAGCCTTCCTCCTCTTCTTCTTTGGTTTCTGCGGGCAACATGAACATCACTGTGGACAACGCAGCAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTGAAGCGAAGAAAGAGCCAGGCGAAGAAGGTGGTGTGTATACCTGCACCAGCAGCTGCAAATAGCAGACCAAGTAGTGGGGAGGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCTTATCCAAGGGGTTACTACAGATGTAGCAGCTCCAAGGGTTGTTCAGCAAGAAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACCTCAGAGCACAACCATCCATGGCCGACTCAACGAAACGCTCTCGCCGGCTCCTCAAGGTCTCAGCCTTCCAAAAACAACAACAACAATGCTCCCAAGAACAACTACAACAACAACTCCGATAATCAGGCTTTGATTCGGCCGCCAAAGCTGGAGGAGGAGGAGAATCATCAAGAGCAGCAGCAGAGAGGGAAACTTAGCTCATCATTATCAGTGAAGGAGGAGATGGAACTGGAGGAGAATAATGATCAAGAAGAGCTTCAGAATATGATGATGGAAGATGATAATAATGGATCTGAAGCTGGAGGAGTGGGATACAAGCCATGTATGTTGGATCAGAGCAATAATATTAATCAGACTTCTGAGGATTTCTTTGCAGAATTGGGAGAGATAGAAGCTGACCCACTGAATCTCCTGTTCAGTCAAACAGGTTACAACGAAGAGAATCATCATCATCAGAGAGAATCCAAAGCTTTAGATCCTTTCGGTAATCTCTTTGTTGACTGGTCATCATCATCTTCTGCATCAGCATCAGCAGATCATATTCACGACACGACCACCACTTCATTTGAAGAACCAAAAGACAGGGTTATAACAAGACCTTGA 1572 0.4625 MCSSILSSIMDNNYHQGDLTDIFRASGGGGGGGGGGGGLHGTSSSSTSELAPHDLSSSSSESWHHHHHHQHQHQQQHHQMNFCSVMMEDSLRAANFFGDPFSSIRDPFLQDLEFHLPSYFSSAPNNSVIEGASPGFSATSSVVLSHHDNMRIRPPPLASGNNTTTIFSNLIQISPNAAVAKFPVSLCDSPPVNMAAVNSSSSSSRGIEPSSSSSLVSAGNMNITVDNAAVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQPSKNNNNNAPKNNYNNNSDNQALIRPPKLEEEENHQEQQQRGKLSSSLSVKEEMELEENNDQEELQNMMMEDDNNGSEAGGVGYKPCMLDQSNNINQTSEDFFAELGEIEADPLNLLFSQTGYNEENHHHQRESKALDPFGNLFVDWSSSSSASASADHIHDTTTTSFEEPKDRVITRP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2849 523 MobiDBLite consensus disorder prediction 498 523 - -
Acco06g2849 523 ProSiteProfiles WRKY domain profile. 265 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g2849 523 Pfam WRKY DNA -binding domain 272 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g2849 523 MobiDBLite consensus disorder prediction 507 523 - -
Acco06g2849 523 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 151 462 IPR044810 GO:0003700
Acco06g2849 523 Gene3D WRKY domain 243 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g2849 523 MobiDBLite consensus disorder prediction 369 383 - -
Acco06g2849 523 SUPERFAMILY WRKY DNA-binding domain 268 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g2849 523 MobiDBLite consensus disorder prediction 39 58 - -
Acco06g2849 523 SMART WRKY_cls 270 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g2849 523 Coils Coil 395 417 - -
Acco06g2849 523 MobiDBLite consensus disorder prediction 287 404 - -
Acco06g2849 523 MobiDBLite consensus disorder prediction 25 79 - -
Acco06g2849 523 FunFam probable WRKY transcription factor 14 243 324 - -
Acco06g2849 523 MobiDBLite consensus disorder prediction 314 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2849 Acco-ChrAcco06 33143631 33146961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2849 1 471 WRKY Transcription Factor Family AT2G34830 39.721 1.81e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g2849 WRKY 3.1e-25 CL0274