Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2826 ATGATCAACACGATCGCCGTTAAAGACATGCGAAGTAGACCGTATCAGAAAATGAAGGTGGAGAACTCAAACGGAGAGATCTTTGCCGAAAACAATGGTTCTGAATCCCTCGTCAGCTTCTCCGATGGTCTTCAGTCGCCAAATTCTTCTATGGCAAATGGGGTTGATGTCGATAAAGATGGGGACGAGATATTCGTCCCTCCTCTGAACTTCGCAATGGTCGATAATGGCATTTTCAGGGCTGGGTTCCCTGATTCTGCCAATTTCGGGTTCTTAAAATCTCTTCGCCTCCGCTCGGTTATATGTTTGTGCCCTGAACCATATCCAGAAGCAACTTCCGAATTTTTAAATGCTAATGGAATAAAACTTTATCAATTTGGGATCGATGCCTTCAAGGAACCCTTTGTTAACATCCCAGAGCATACAGTGCGTGAAGCATTGCAAGTAGTCCTTGATGTTAGGAACCACCCTGTGCTAATTCATTGCAAGCGAGGAAAGCATCGCACTGGATGCATTGTGGGGTGCTTAAGGAGATTGCAGAGGTGGTGTCTATCATCTGTATTTGATGAGTACCAAAGGTTTGCTGCTGCAAAAGCAAGGGTGTCCGATCAGAGGTTTATAGAATTGTTTGACATTTCTAATTTGAAGAACAATCCAATGTCATTTTCATGCTCAAAGAAGTAG 684 0.4357 MINTIAVKDMRSRPYQKMKVENSNGEIFAENNGSESLVSFSDGLQSPNSSMANGVDVDKDGDEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRSVICLCPEPYPEATSEFLNANGIKLYQFGIDAFKEPFVNIPEHTVREALQVVLDVRNHPVLIHCKRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISNLKNNPMSFSCSKK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2826 227 ProSitePatterns Tyrosine specific protein phosphatases active site. 160 170 IPR016130 GO:0016311|GO:0016791
Acco06g2826 227 ProSiteProfiles Dual specificity protein phosphatase domain profile. 70 224 IPR020422 GO:0006470|GO:0008138
Acco06g2826 227 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 65 212 IPR029021 -
Acco06g2826 227 PRINTS Plant and fungal dual specificity phosphatase signature 138 152 IPR020428 GO:0016791
Acco06g2826 227 PRINTS Plant and fungal dual specificity phosphatase signature 102 115 IPR020428 GO:0016791
Acco06g2826 227 PRINTS Plant and fungal dual specificity phosphatase signature 65 82 IPR020428 GO:0016791
Acco06g2826 227 PRINTS Plant and fungal dual specificity phosphatase signature 121 135 IPR020428 GO:0016791
Acco06g2826 227 Pfam Tyrosine phosphatase family 66 218 IPR004861 -
Acco06g2826 227 FunFam probable tyrosine-protein phosphatase At1g05000 64 214 - -
Acco06g2826 227 CDD PFA-DSP_Siw14 65 211 - -
Acco06g2826 227 Gene3D Protein tyrosine phosphatase superfamily 64 214 IPR029021 -
Acco06g2826 227 PANTHER TYROSINE-PROTEIN PHOSPHATASE 57 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2826 Acco-ChrAcco06 32382594 32387841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2826 58 227 Protein tyrosine phosphatase (PTP) family AT4G03960 72.353 1.92e-97 280