Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2801 ATGGCGGCCACGTGTTTTCATCCACTTCGATTACCAAAGTGGAAAAGGAAAACGTTATTACCGGCGGCGTCTTCGTCTTCTTCGTCATCGTCGAAGAGGCAGTTGAATTGCGAGGAGGAGAATTTGGAAGGGAAGAGATTCGATAGTTTGGAATCATGGTCCACGATATTGGAGTCTGAGAATTTGGAGACATGGGAGGCTTTAAAGGAGGATCATCAGGAAGAATGGGCCGCCGATCTTTCTCAGCTTCTCATCGGAAACAGGTTCGCTTCCGGCGCTCACAGTCGGATTTATCGCGGAATTTACAAGCAGAGAGCCGTGGCTGTGAAAATGGTTAGAATTCCGACTGCGAATGATGACAAAAGAACTTTCCTGGAGCAGCAATTTAAATCTGAAGTTGCATTACTTTCGCGTCTCTTTCATCCTAATATAGTTCAGTTTATTGCAGCTTGTAAAAGACCACCAGTGTACTGTATCATAACAGAGTACATGTCACAAGGAAATCTGAGGATGTACCTGAACAAAAAAGAGCCACACTCTCTCTCAACCGAGACAATACTAAGATTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCATTCACAAGGTGTAATTCACAGAGACCTCAAGTCGAATAACTTGCTTCTCGATGATGAGATGAGGGTTAAAGTAGCAGATTTCGGCACATCATGCCTTGAAACGCAATGCCACCGGGAAAACAAAGAAAGAAACATGGGGACGTATCGTTGGATGGCCCCAGAGATGATCAAGGAAAAATCGTATACTCGAAAAGTGGATGTTTATAGTTTTGGAATTGTGCTATGGGAACTCACCACTGCTTTACTTCCTTTCCAAGGAATGACCCCTGTCCAAGCTGCATTTGCTGTGTCAGAGAAGAACCAAAGGCCACCATTGCCGGAAAGTCGTCAGCCGGCACTTGCACATCTGATGAAGTGTTGCTGGGCGGTGAATCCCTCGAAGCGACCGGATTTCAGAGAAATTGTGTCTGTTTTGGAAAAATATGATGAATGTGTCAAGGAAGGCCTACCTCTCACTCATTATTCAGCCTTTGCCACTAAAAATGTCATCATTCGACGCTTAAAAGGTTGTGTACCCATGAGTTCCTCTGTACCTGTACATGCCTGA 1149 0.4482 MAATCFHPLRLPKWKRKTLLPAASSSSSSSSKRQLNCEEENLEGKRFDSLESWSTILESENLETWEALKEDHQEEWAADLSQLLIGNRFASGAHSRIYRGIYKQRAVAVKMVRIPTANDDKRTFLEQQFKSEVALLSRLFHPNIVQFIAACKRPPVYCIITEYMSQGNLRMYLNKKEPHSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLDDEMRVKVADFGTSCLETQCHRENKERNMGTYRWMAPEMIKEKSYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVSEKNQRPPLPESRQPALAHLMKCCWAVNPSKRPDFREIVSVLEKYDECVKEGLPLTHYSAFATKNVIIRRLKGCVPMSSSVPVHA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2801 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Acco06g2801 382 FunFam Serine/threonine-protein kinase isoform 1 73 165 - -
Acco06g2801 382 Gene3D Phosphorylase Kinase; domain 1 72 165 - -
Acco06g2801 382 Gene3D Transferase(Phosphotransferase) domain 1 166 361 - -
Acco06g2801 382 ProSiteProfiles Protein kinase domain profile. 83 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2801 382 CDD STKc_MAP3K-like 90 339 - -
Acco06g2801 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 342 - -
Acco06g2801 382 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
Acco06g2801 382 PRINTS Tyrosine kinase catalytic domain signature 310 332 IPR001245 GO:0004672|GO:0006468
Acco06g2801 382 PRINTS Tyrosine kinase catalytic domain signature 247 257 IPR001245 GO:0004672|GO:0006468
Acco06g2801 382 PRINTS Tyrosine kinase catalytic domain signature 199 217 IPR001245 GO:0004672|GO:0006468
Acco06g2801 382 PRINTS Tyrosine kinase catalytic domain signature 161 174 IPR001245 GO:0004672|GO:0006468
Acco06g2801 382 SMART serkin_6 83 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2801 382 SUPERFAMILY Protein kinase-like (PK-like) 63 339 IPR011009 -
Acco06g2801 382 Pfam Protein tyrosine and serine/threonine kinase 85 339 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2801 Acco-ChrAcco06 31050017 31053027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2801 1 372 MAP Kinase Kinase Kinase AT1G62400 78.571 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco06g2801 PK_Tyr_Ser-Thr 1.6e-67 CL0016