Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2794 ATGAAAGATTTTGGCTTATTCAAGCGCATAGCCTTTGTGTTATTTGTTCCCTTATTTCTACTTTGCCCTTCTGTTTATGGATATTCATGGAATGAGGTTAAGCTTTGGTGCAACCAAACCCCTAATCCTCAGCCATGTGAGTACTTCCTAAACAAAAATCCCGTTCATAGCCAAAAGATCATCAAATACAAACATGATTTTCTTAAGCTTTCACTTCAACTAGCCCAAGAGCGAGCGTTGATTGGCCATACAAATACTCTTTCTCTAGGACCCAAGTGTCGTAATCCTCAAGAAAAGGCTGCATGGTCTGATTGTATTGAGCTTTATGAGCATACAATCCAGAGACTGAACAAAACCCTAGACCCCATCACCAACTGCTCCCAAGAGGATGCTCAAACATGGCTCAGCACTGCTGTCACCAACATTGAGACATGCCGAGCCGGGTTCTATGAGCTCGGGGTCCAAGACTACGTGTTGCCTTTGATGTCCAACAACGTCACTAAGTTGTTGAGCAACACTTTGGCTTTGAACAAAGTTGAATACAAAGAGCCAAGTTATAAAGATGGCTTTCCAACATGGGTTAAGCCTGGAGATAGGAAGTTGTTGCAGTCTTCTTCTTCATCTTCTAGGGCTAACGTCATTGTGGCTAAAGATGGATCTGGCAAATACACAACTATAACTGCTGCTATAAATGCATCACCAAAGAGTAGTAGTGGGAGGTATGTGATATACGTGAAGGCTGGAACTTACAACGAACAGGTAGAGATAAAGGCAAAGAATATCATGTTACTTGGAGATGGTATTGGGAAGACTATAATCACAGGAAGCAAAAGTGTTGGAGGAGGCACGACAACCTTCCGGTCAGCCACTGTGGCTGTTGTTGGGGATGGATTTATTGCACAAGGCATCACATTTAGAAACACTGCTGGAGCTTCAAATCACCAAGCTGTTGCACTACGTTCTGGTTCAGATTTATCAGTCTTTTACAGATGCAGCTTTGAAGGTTACCAAGACACATTATATGTGCACTCTGAGCGACAATTCTACAGAGAATGTGATATTTACGGCACAGTTGATTTCATCTTTGGTAATGCAGCAGTCGTTTTCCAAAACTGCAACATTTTTGCAAGAAACCCTCCTAACAAAGTTAACACGATCACAGCCCAAGGTCGAACTGATCCAAACCAAAACACAGGAATTTCTATTCACAATTGTAGGGTTACAGCTGCTTCCGATTTAAAGCCAGTTCAAAGCTCCGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCTCGAACAGTCTTCATAAAGACTTTCTTGGACAGTTTGATAAACCAGGCTGGTTGGTTGGAATGGAGTGGTAACTTTGCCTTGAACACTCTATACTATGGAGAGTACATGAATACAGGTGCAGGTTCATCCACTGCAAATCGTGTTAAGTGGCCCGGCTATCATGTGATTTCTAGTGCCACTGAAGCTTCCAAATTCACTGTTGCAAACTTCATTGGAGGGAATTCATGGTTGCCATCCACCAACGTTCCTTTCACTTCTACTTTATAG 1563 0.4242 MKDFGLFKRIAFVLFVPLFLLCPSVYGYSWNEVKLWCNQTPNPQPCEYFLNKNPVHSQKIIKYKHDFLKLSLQLAQERALIGHTNTLSLGPKCRNPQEKAAWSDCIELYEHTIQRLNKTLDPITNCSQEDAQTWLSTAVTNIETCRAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVEYKEPSYKDGFPTWVKPGDRKLLQSSSSSSRANVIVAKDGSGKYTTITAAINASPKSSSGRYVIYVKAGTYNEQVEIKAKNIMLLGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVTAASDLKPVQSSVKTYLGRPWQQYSRTVFIKTFLDSLINQAGWLEWSGNFALNTLYYGEYMNTGAGSSTANRVKWPGYHVISSATEASKFTVANFIGGNSWLPSTNVPFTSTL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2794 520 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
Acco06g2794 520 Gene3D - 206 520 IPR012334 -
Acco06g2794 520 FunFam Pectinesterase 206 520 - -
Acco06g2794 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 179 IPR035513 -
Acco06g2794 520 SUPERFAMILY Pectin lyase-like 207 519 IPR011050 -
Acco06g2794 520 Pfam Pectinesterase 212 506 IPR000070 GO:0030599|GO:0042545
Acco06g2794 520 CDD PMEI-like_3 35 178 - -
Acco06g2794 520 SMART complete 245 423 IPR006633 -
Acco06g2794 520 ProSitePatterns Pectinesterase signature 1. 237 256 IPR018040 -
Acco06g2794 520 PANTHER PECTINESTERASE 19 512 - -
Acco06g2794 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 179 IPR035513 -
Acco06g2794 520 SMART PMEI_2 28 176 IPR006501 GO:0004857
Acco06g2794 520 Pfam Plant invertase/pectin methylesterase inhibitor 32 176 IPR006501 GO:0004857
Acco06g2794 520 NCBIfam pectinesterase inhibitor domain 10 178 IPR006501 GO:0004857
Acco06g2794 520 FunFam Pectinesterase 28 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2794 Acco-ChrAcco06 30745887 30747652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2794 9 520 Carbohydrate Esterase AT2G45220 68.288 0.0 723