Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2793 ATGGCAACTTTGTTCAGCTCAATCTTATTATCATCATCTGTTCTTCTGCTTGTTCCATTCTTATTTTCCACTTTGGCTTCTGGCTATTCTTCTAATGAGGTCAAATTATGGTGTAGCCAAACCCCTAATCCTCAACCATGTGAGCATTTCTTGAACCAAAACCCTTCGCATCAATACAAACCCATAAACAACAAAGATGATTTCTTCAAACTTTCTCTACAGCTCACCAAGGACCGAGCTCTGGTCGGCCACGCAAACGCGATTTCGCTCGGCCCAAAGTGCCGGAACCAAAGGGAAAAACTTGCATGGGCTGATTGCCTAGAACTGTATGAGCACACCATACTCAAACTCAACAAAACCTTAAACCCTAACACCAAGTGCACCCAAACTGATACTCAAACATGGCTCAGCTCAGCTCTCACAAATCTTGAGGCATGTAAAGCTGGCTTTTATGAACTTGGGGTTCAAGACTATGTGTTGCCTTTGATGTCCAACAATGTCACCAAGTTGCTAAGCAACACTTTGGCTCTAAACAAGGTTCCATATGATGAACCAAGTTATAAAAATGGGTTCCCAACTTGGGTCAAGCCGGGTGACAGGAAGCTGTTGCAGGGTTCTTCTCCATCTTCTCTGGCGAATGTCGTGGTAGCTAAAGATGGATCCGGCCACTTCACAACAGTTAGTGCCGCCATAAGTAGTGCACCAGAGGGTAGCAGTGGTAGGTATGTTATATATGTGAAGGCAGGAATATACAATGAACAAGTTGATATAAAACTCAACAATATCATGTTAGTTGGGGATGGTATTGGAAAAACTATCATTACTGGTAGCAATAGTGTTGGAGGAGGCACCACTACCTTCCGTTCTGCAACTGTTGCTGTTGTTGGGGATGGCTTTATTGCACAAGGCATCACATTCAGGAACACCGCTGGAGCATCAAACCACCAAGCTGTAGCGTTACGTTCAGGTTCAGACCTATCAGTATTCTACAAATGTAGCTTTGAAGGATATCAAGACACATTATATGTGTTCTCTGAGAGACAATTTTATAGGGAATGTGACATTTATGGCACAGTTGATTTCATCTTTGGAAACGCAGCCGTAGTTTTCCAAAATTGCAACCTTTTTGCTAGAAACCCTCCCAACAATGTCAACACGATCACCGCCCAAGGTCGAACTGATCCGAACCAAAACACTGGAATTTCTATTCACAATTGTAGGGTTACGGCTGCCTCAGACTTTCAAAGTTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCTCGAACAGTTTTCATGAAGACCTTCTTGGACAATTTGATTGATCTTGCTGGTTGGTTGGAATGGAGTGGTAACTTTGCCTTAAACACTTTGTACTATGGAGAGTACATGAACAATGGTCCAGGTTCATCCACTTCAAATCGTATTAAGTGGTCAGGTTACCACATAATCACCAGTGCTTCAGAAGCTTCAAAGTTCACTGTCGCAAATTTCATTGGAGGAAATTCATGGCTTCCAGCCACCAGTGTTCCTTTCACTTCAAGTTTATAG 1557 0.4277 MATLFSSILLSSSVLLLVPFLFSTLASGYSSNEVKLWCSQTPNPQPCEHFLNQNPSHQYKPINNKDDFFKLSLQLTKDRALVGHANAISLGPKCRNQREKLAWADCLELYEHTILKLNKTLNPNTKCTQTDTQTWLSSALTNLEACKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVPYDEPSYKNGFPTWVKPGDRKLLQGSSPSSLANVVVAKDGSGHFTTVSAAISSAPEGSSGRYVIYVKAGIYNEQVDIKLNNIMLVGDGIGKTIITGSNSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYKCSFEGYQDTLYVFSERQFYRECDIYGTVDFIFGNAAVVFQNCNLFARNPPNNVNTITAQGRTDPNQNTGISIHNCRVTAASDFQSSVKTYLGRPWQQYSRTVFMKTFLDNLIDLAGWLEWSGNFALNTLYYGEYMNNGPGSSTSNRIKWSGYHIITSASEASKFTVANFIGGNSWLPATSVPFTSSL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2793 518 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
Acco06g2793 518 SMART PMEI_2 29 177 IPR006501 GO:0004857
Acco06g2793 518 Pfam Plant invertase/pectin methylesterase inhibitor 33 177 IPR006501 GO:0004857
Acco06g2793 518 PANTHER PECTINESTERASE 17 510 - -
Acco06g2793 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 181 IPR035513 -
Acco06g2793 518 Pfam Pectinesterase 213 504 IPR000070 GO:0030599|GO:0042545
Acco06g2793 518 CDD PMEI-like_3 36 179 - -
Acco06g2793 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 180 IPR035513 -
Acco06g2793 518 Gene3D - 209 518 IPR012334 -
Acco06g2793 518 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Acco06g2793 518 NCBIfam pectinesterase inhibitor domain 11 180 IPR006501 GO:0004857
Acco06g2793 518 SMART complete 246 418 IPR006633 -
Acco06g2793 518 FunFam Pectinesterase 208 518 - -
Acco06g2793 518 SUPERFAMILY Pectin lyase-like 212 515 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2793 Acco-ChrAcco06 30737641 30739300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2793 15 518 Carbohydrate Esterase AT2G45220 65.945 0.0 706