Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2712 ATGTCAGAAATGCGGGTTTCTGATCTCCACTTGAAGAAGGAGCTCACTCAAATTCGCAAAGCTGCTCGTGTATTGAGGGATCCTGGTACTACTTCTTCGTGGAAGTCGCCACTTAGTTCGTCGAGATCTGTAGCGGCTGCTTCCGCATGGAAGAACAATGGCAGCTCTCAAATTCATTCTCAGTTGTCTCTTCCGAGTGCGAGCAACAATGGGAAAGACAAGATGGTGTTCTTGTACAATTGGAAGAATTACAAATCATCGAGTGAGAAACACAATGGCGATGATAAAGACGAAGAAGACGAGGAGTATGATGAAGATGGTGGTGGAAATGATGGATCTTCGTCACTTCTGGGGAGTTTCGAGGATAGCCTCAGTGATGCTCGCAATGGTTGCGATTCCAAGAGCGATACTTGCGTAGGGATTGGTGGGAGTGGGATTCGTTCTTCCATTTTCAGGTGTAAAGATGCAAATCCTGTTGCGTTAGGCACGCCATCGACCAGAAGAGCACTGGAGATTAAGAAAAAGAGTAAGAAAAGCAAAAATGCCCATTTGTATATTCTAAGAAAATATCAGCAAAGAGAAACCAATATTGGGCAAGCTTTAGTGAATCCCAAGCATCATATTCATCGGTCAGTAGCGTGTAGCCGGGAGGACTCGGTTGGGCAGTCTGATGATACTGAAGATTACTGCAATTCTGAAGATTTAACACGAAACTCAGGACCATCTCCTTTGCTTTTGAAGCTCAAGCATAAGAATTGGTCTCGCCCTAACTCTAAGTTATTGAAAAGTAATAGAAAACAGGATTCTTCTTATAGCACTCCAGCAATGTCTACCAGTTCTTATAATAGGTATGGTCAACAAAATCCTAGTACCGTTGGATCCTGGGATGGCACGACAACCTCGGTAAATGATGCTGATGATGAAGTAGATGATCTTTTGGATTTGCCTGGTCGCCAAGGATGTGGGATACCTTGCTATTGGTCAAAGAAGACTCCAAAACATCGAGGGATGTGTAGGAGTTGTTATTCACCTTCACTTTCCGACACTCTAAGGAGGAAAGGAAGTAGCATGCTTTGTGGAAGTCAAACTATCTATCCTAGACACCGGAGATCCTTGTCAAGCTCTCACAAACGGAGAATTTCCTCTAGGAGTGCTCAAGGTGTTCTCCCATTGCTCACTAACAGTGATGATGTTAGAGGGTCATCTCTAGGAACTGGCATGAGTGATGATGAGCTTTCTACAAACTATGGCGAGCTTGATCTTGAGGGCATAAGCAGGTTGGATGGAAGAAGGTGGTCCTCAAGTTGTAGGAGTCAAGAAGGATGGGAGATTGTAGCTTTCAATGGAGAAGGGGATGATGAAGGCACTTCAGAAAATAGTAGGAGTTACAGTCAAAAGTATAAGCCTATGTTCTTTAGTGAATTGATTGGGCAGAATATTGTGGTCCAATCACTTATAAATGCTCTTTCAAGAGGTCGAATTGCTCCTGTTTATCTTTTCCATGGTCCACGTGGGACTGGTAAAACATCAGTGGCCAGGATTTTTGCTGGTGCATTGAATTGTATAACTCCTGATGAAACTAAACCTTGTGGCTACTGCAGGGAATGTGCAAATTTCATTTCTGGGAAGAGCAGGGTCCTTTTGGAAGTTGATGGAACCAATAAAAAAGGGATTGATAGAGTTAGACATCTATTGAGAAGATTATCAGTAAGGTCTTCTTCAGCCTCCTCACGATATGTGGTCTTTGTTATTGATGAGTGTCATTTGTTACCCTCTAAGACATGGTTGGCATTTCTTAAATCTCTGGAAGATTTACCCCAGCGAGTTGTGTTTATATTTATAACAACAGATCTTGACAATGTGCCACGAACAATACAATCAAGATGCCAAAAGTACCTTTTTAACAAAATTAAAGATGCAGATATAGTACTACGGCTAAGGAAAATATCTGCTGAGGAGAACCTGGATGTTGAAACAGATGCGTTGGATCTTATTACTACCAATGCAGACGGGTCACTTCGGGATGCAGAAACTATGTTAGAACAGCTGAGTTTGCTGGGAAAAAGAATCACTACTAGTCTTGTCAATGAACTTATGGGGGTTGTTTCAGATGAAAAATTACTGGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTGAAAAGGGCCAGAGAATTGATGGACTCTGGAGTTGATCCAATTGTTTTGATGTCCCAACTGGCAAGCCTCATTATGGACATCATTGCCGGATCATATACTGTTATAGATGACAAACCTGGTGATTCATTTCTTGGCGGACGAAGTTTGAATGAATCGGAGTTGGAGAGATTAAAGCATGCTTTGAAGCTTCTCTCAGAGGCTGAGAAACAATTAAGGACTTCTAGCGAACGCACGACATGGTTCACAGCTACTCTGTTACAACTAGGGTTGATGCCTTCACCCGATCTTACTCAGACCACCACCAGCAGGAGGCAGAGTAGCAAGACTACTGATGATGATCCATCAAGTGCTTCAAGAGAAGTAACTGCTCACAGGCACAAGTCAGATGTTCAGTGTATGCCTCGAAAATCTACATCACCTGCATCTCTGCAGAAAGCTGTGAATAGCAATCCCAGCCACCAAAGGGAGTTATCATCAAAGTTTGATGGTTTCAGCCTGAATTCAAAGCCGTCAAATTGCCCAGTCGATGATGCTGCACCCGTTTCATTTTATGATCGTACAGTCAGTAATGTTACATTTAGATGCATAGATTCAGGGAAGTTATGTGATATCTGGGCACACTGTATTGGAGGGTGTCACTCCAAGACATTGAAGCAGCTGCTACTTAATCATGGAAAGCTTATATCCATATGTGAAGTTGAAGGTCTGCTGGTTGCATGTGTTGCATTTGGGGATGCAGATATTAAACTTAGGGCTGAAGGGTTTTTGAGCAGCATAACAAACTCCATGGAAATGGTTTTGAGACGAAATGTGGAGGTTAGAATAATCCACTTGCTTGATGGTGAAGGTGAAGATCAGATCAATCTATCAGGCCCAAAAAAGCCAGAATCAATAATAGCAAATGAGAAGGAACATAGACAAGGTCATACAAGAGGAAGAGACACTTTCTCAGATTTTCCTCCTTTGCTGGGTGGAAACTTGCAATCTACCAATGATTCGTCAGATTTACTGGTTGATGGAAATGGTGTAAGAGAGAGAACAGATATTCCAATGCAAAGGATTGAATCCATTATTCGTGAGCAGAGGCTGGAAACTGCTTGGTTACAGGCTGTAGGAAAAGGCTCCCCAGGATCTTTAAGTCGCTTAAGACCTGAAAAGAATCAGGTCCTACCTCAGGAAGGTATCTACTGTAAAGTCCCAACAGAGTCCATGGACTCAACGAGGTTCTCCTCTCAGCATAGGGAAGATGACATCGATCATGAAGTCAAAGTTTTGAAAGCTAAAAATGAGAGGGTCCTACAGAAGGATCAGATTGGACTTGGAAGAAGGGCTGACTGTTACTCCATGTCCCCTAGTTTATTGCATGATGGCAGTTTAGCAGGAACTTCCATTTCCATCAAAGAGAGTCTGGGATATGAATCAGGAGCGGGAGCTAGAGGTTGTAGTGGATTTTTGTGTTGGAACAACTCCAGCCGTAGAAGGGTAAAGGTAAAAGGTACCCCAGTGCGGAAAGTGGGACGCTATTCATTGTTTGGCGAGTGTGGTAAGTCAAAGAAAAAGAGCTGA 3735 0.4284 MSEMRVSDLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAASAWKNNGSSQIHSQLSLPSASNNGKDKMVFLYNWKNYKSSSEKHNGDDKDEEDEEYDEDGGGNDGSSSLLGSFEDSLSDARNGCDSKSDTCVGIGGSGIRSSIFRCKDANPVALGTPSTRRALEIKKKSKKSKNAHLYILRKYQQRETNIGQALVNPKHHIHRSVACSREDSVGQSDDTEDYCNSEDLTRNSGPSPLLLKLKHKNWSRPNSKLLKSNRKQDSSYSTPAMSTSSYNRYGQQNPSTVGSWDGTTTSVNDADDEVDDLLDLPGRQGCGIPCYWSKKTPKHRGMCRSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSLSSSHKRRISSRSAQGVLPLLTNSDDVRGSSLGTGMSDDELSTNYGELDLEGISRLDGRRWSSSCRSQEGWEIVAFNGEGDDEGTSENSRSYSQKYKPMFFSELIGQNIVVQSLINALSRGRIAPVYLFHGPRGTGKTSVARIFAGALNCITPDETKPCGYCRECANFISGKSRVLLEVDGTNKKGIDRVRHLLRRLSVRSSSASSRYVVFVIDECHLLPSKTWLAFLKSLEDLPQRVVFIFITTDLDNVPRTIQSRCQKYLFNKIKDADIVLRLRKISAEENLDVETDALDLITTNADGSLRDAETMLEQLSLLGKRITTSLVNELMGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPIVLMSQLASLIMDIIAGSYTVIDDKPGDSFLGGRSLNESELERLKHALKLLSEAEKQLRTSSERTTWFTATLLQLGLMPSPDLTQTTTSRRQSSKTTDDDPSSASREVTAHRHKSDVQCMPRKSTSPASLQKAVNSNPSHQRELSSKFDGFSLNSKPSNCPVDDAAPVSFYDRTVSNVTFRCIDSGKLCDIWAHCIGGCHSKTLKQLLLNHGKLISICEVEGLLVACVAFGDADIKLRAEGFLSSITNSMEMVLRRNVEVRIIHLLDGEGEDQINLSGPKKPESIIANEKEHRQGHTRGRDTFSDFPPLLGGNLQSTNDSSDLLVDGNGVRERTDIPMQRIESIIREQRLETAWLQAVGKGSPGSLSRLRPEKNQVLPQEGIYCKVPTESMDSTRFSSQHREDDIDHEVKVLKAKNERVLQKDQIGLGRRADCYSMSPSLLHDGSLAGTSISIKESLGYESGAGARGCSGFLCWNNSSRRRVKVKGTPVRKVGRYSLFGECGKSKKKS 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2712 1244 NCBIfam DNA polymerase III subunit gamma/tau 462 811 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Acco06g2712 1244 MobiDBLite consensus disorder prediction 87 119 - -
Acco06g2712 1244 MobiDBLite consensus disorder prediction 45 66 - -
Acco06g2712 1244 MobiDBLite consensus disorder prediction 1027 1059 - -
Acco06g2712 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 684 IPR027417 -
Acco06g2712 1244 MobiDBLite consensus disorder prediction 214 243 - -
Acco06g2712 1244 Gene3D - 638 700 - -
Acco06g2712 1244 FunFam DNA polymerase III subunit gamma/tau 458 636 - -
Acco06g2712 1244 CDD HLD_clamp_pol_III_gamma_tau 637 700 IPR045085 -
Acco06g2712 1244 MobiDBLite consensus disorder prediction 1045 1059 - -
Acco06g2712 1244 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 464 859 - -
Acco06g2712 1244 Gene3D - 701 815 - -
Acco06g2712 1244 Coils Coil 773 800 - -
Acco06g2712 1244 Gene3D - 453 635 IPR027417 -
Acco06g2712 1244 Pfam DNA polymerase III subunits gamma and tau domain III 691 757 IPR022754 GO:0003887
Acco06g2712 1244 MobiDBLite consensus disorder prediction 257 302 - -
Acco06g2712 1244 CDD AAA 476 634 - -
Acco06g2712 1244 MobiDBLite consensus disorder prediction 856 881 - -
Acco06g2712 1244 MobiDBLite consensus disorder prediction 829 855 - -
Acco06g2712 1244 SMART AAA_5 494 656 IPR003593 GO:0016887
Acco06g2712 1244 SUPERFAMILY post-AAA+ oligomerization domain-like 708 811 IPR008921 GO:0003677|GO:0006260
Acco06g2712 1244 MobiDBLite consensus disorder prediction 815 881 - -
Acco06g2712 1244 MobiDBLite consensus disorder prediction 256 302 - -
Acco06g2712 1244 FunFam DNA polymerase III subunit gamma/tau 638 700 - -
Acco06g2712 1244 Pfam DNA polymerase III, delta subunit 477 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2712 Acco-ChrAcco06 28161856 28169469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2712 458 760 Core DNA Replication Machinery Family AT1G21690 24.038 1.07e-16 81.3