Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2704 ATGGGTATATACAGGAAAAGGCTTTTTCAAATGATAAATGATCTCCCAACTATATTTGAAGTTGTGACAGGAAGTGCCAAGCAATCAAATGATCAATTAGCTGCTCATACCAATGGTAACAAAGGAAAATCAAGTGGGAAGTCCCGCCAATCTGAGTCACATGCGAGGGGAGTGAAGATGTCACCACCACCCAAAGATGAGGATGAGAGTGGAGAAGAAGATGAAGACGATGAACAAGGTGCAACATGTGGGGCGTGTGGTGATAACTATGCCAATGGTGAATTTTGGATCTGTTGCGATGTGTGTGAAAGATGGTTCCATGGGAAATGTGTCAAAATTACTCCTGCTAAGGCTGAACACATTAAGCAATACAAGTGCCCAAGCTGCAGCAACAAAAGGACTAGAGTCTAG 411 0.4307 MGIYRKRLFQMINDLPTIFEVVTGSAKQSNDQLAAHTNGNKGKSSGKSRQSESHARGVKMSPPPKDEDESGEEDEDDEQGATCGACGDNYANGEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRTRV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2704 136 CDD PHD_AL_plant 83 132 IPR044104 -
Acco06g2704 136 ProSiteProfiles Zinc finger PHD-type profile. 80 132 IPR019787 -
Acco06g2704 136 ProSitePatterns Zinc finger PHD-type signature. 83 129 IPR019786 -
Acco06g2704 136 MobiDBLite consensus disorder prediction 26 80 - -
Acco06g2704 136 MobiDBLite consensus disorder prediction 47 66 - -
Acco06g2704 136 FunFam PHD finger alfin-like protein 75 131 - -
Acco06g2704 136 SMART PHD_3 82 130 IPR001965 -
Acco06g2704 136 Pfam PHD-finger 83 132 IPR019787 -
Acco06g2704 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 131 IPR013083 -
Acco06g2704 136 PANTHER CPG BINDING PROTEIN 5 135 IPR045104 GO:0006355|GO:0042393
Acco06g2704 136 MobiDBLite consensus disorder prediction 26 46 - -
Acco06g2704 136 SUPERFAMILY FYVE/PHD zinc finger 72 133 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2704 Acco-ChrAcco06 28053325 28053836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2704 5 133 Alfin-like Transcription Factor Family AT1G14510 75.194 3.61e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Acco06g2704 PHD 3.5e-11 CL0390