Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2697 ATGGCAATTGTAGCAACCTCATCCTCATCTCCCACCATGAGCCTCAGCCACGATGACACCACCACAACCGCCGCCACCAATGGCTGCAGCACCCTCAACAGCCCTGATGAAGACTACAACGACAACAACGACAACCACCAGCACGACATGGTCATGCCCGGCTTCCGCTTCCACCCAACAGAAGAAGAACTGATCGACTTCTACCTTCGCCGGAAAGTCGAAGGCAAGCGTTTCAATGTCGAGCTCATTACCTTCCTCGATCTCTACCGCTACGACCCATGGGAACTTCCTGCTATGGCGGCCATCGGAGAGAAGGAGTGGTACTTCTATGTTCCAAGAGATAGGAAGTACCGGAACGGTGATCGGCCGAACAGAGTGACGACATCGGGGTATTGGAAGGCGACCGGAGCTGATAGAATGATTCGAGCGGTGGAGAGTTCAAGGTCAATCGGGTTGAAGAAAACCCTAGTTTTCTATTCAGGCAAAGCTCCAAAAGGGATTAGAACCAGTTGGATTATGAACGAGTATCGCTTGCCTCACCATGAAACCCAACGCTTCCAAAAGGCTGAGATATCTCTGTGTAGAGTATACAAGAGACCTGGTGTAGAAGACCATCACCCTCTTCCTCGCAATCTCCAAACAAGACTGTCATCTTCATCAAGACCTTCTTCTTCTTCAGACAAGAATCATTATACTAAGAACAACACCAACCTTGTTCCAGACATGTTTCATCATCATCATCATCAAAACATGGGATTTCTCGAACAACCTCAGAATCATCATCATCAAGATCAGCAAATCACCAACGAAACCGATCAGGGAAGTAGTAGCAGTACAGCTGCAACTACTACCACCACTAACAACAATAATAATTCAATATTAATGATGAGTGATATGAATAGGCTAGTGACTTATAATAATAATAATAATAACCAACAATATTTACAGTACTATAACACTGGTATTATTGACCCTCCTCCTCCTCCTGGAAATCATCATCTTCTTCCTTATCAACACCATCATCTTCAGTTCTCTAATCTGTTATTGCAGCAGCAGCAGCCACAAGTTCATCAACAACCAATGGTAGCTCTGAATAGTTCGCTTCCTATTACCTCTTTCTCTGACAGATTGTGGGAGTGGAATCCTTTAATCCCTGAAGCTACCAACCGAGAGTTCAGCAATATGTCCTTCAAGTAA 1197 0.4511 MAIVATSSSSPTMSLSHDDTTTTAATNGCSTLNSPDEDYNDNNDNHQHDMVMPGFRFHPTEEELIDFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAVESSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETQRFQKAEISLCRVYKRPGVEDHHPLPRNLQTRLSSSSRPSSSSDKNHYTKNNTNLVPDMFHHHHHQNMGFLEQPQNHHHQDQQITNETDQGSSSSTAATTTTTNNNNNSILMMSDMNRLVTYNNNNNNQQYLQYYNTGIIDPPPPPGNHHLLPYQHHHLQFSNLLLQQQQPQVHQQPMVALNSSLPITSFSDRLWEWNPLIPEATNREFSNMSFK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2697 398 Gene3D NAC domain 60 202 IPR036093 GO:0003677|GO:0006355
Acco06g2697 398 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 49 283 - -
Acco06g2697 398 Pfam No apical meristem (NAM) protein 53 178 IPR003441 GO:0003677|GO:0006355
Acco06g2697 398 FunFam NAC domain-containing protein 35 60 202 - -
Acco06g2697 398 MobiDBLite consensus disorder prediction 1 38 - -
Acco06g2697 398 MobiDBLite consensus disorder prediction 211 239 - -
Acco06g2697 398 MobiDBLite consensus disorder prediction 201 242 - -
Acco06g2697 398 ProSiteProfiles NAC domain profile. 51 199 IPR003441 GO:0003677|GO:0006355
Acco06g2697 398 MobiDBLite consensus disorder prediction 1 41 - -
Acco06g2697 398 SUPERFAMILY NAC domain 50 199 IPR036093 GO:0003677|GO:0006355
Acco06g2697 398 MobiDBLite consensus disorder prediction 257 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2697 Acco-ChrAcco06 27872525 27875244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2697 50 215 NAC Transcription Factor Family AT2G02450 91.566 2.04e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g2697 NAM 7.7e-35 No_clan