Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2692 ATGCCTCTCTCAGTCAACATTGGCTTTGGCTACTCCATTGCCATCGCCCTCGCTTTTCTGGTTCTCGCCTCAACGCTCATTCTCTCTTTCTACCTCTGTTGCCGCAAGCGTAACCGAAACCCCAGTCCGGATTCGCACCCGAATCCGAATATGAACCCATCTGGGTCGAATGTGGGATCCGAGGGTATTGTTCTGCCTCGGGTGATTTTTGTGGCGGAGGAGGAGGAGGACGACAATGAGAGCGCCGTCGTGGGGCTTGACGACAACGTTATAAACTCGTACCCGAGGTTTCAGTACAGTAGGGGAGCTATGGGTGTCGGAAGCAGTACGATGTGTTCGATCTGTTTGTGTGAGTATAGAGATTCGGAGATGCTGAGGATGATGCCGGAGTGCCGCCATTATTTCCATCTCTTGTGCCTTGACTCTTGGCTTAAGCTTAATGGGTCTTGCCCTGTTTGCCGGAACTCGCCGCTCATGACGCCGATTTCTACGCCTCTGCAAGAAGTTGTGCCGCTATCTCAGTACCCGGCCGAACGGCGGCGACGGAGGTGA 552 0.5399 MPLSVNIGFGYSIAIALAFLVLASTLILSFYLCCRKRNRNPSPDSHPNPNMNPSGSNVGSEGIVLPRVIFVAEEEEDDNESAVVGLDDNVINSYPRFQYSRGAMGVGSSTMCSICLCEYRDSEMLRMMPECRHYFHLLCLDSWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQYPAERRRRR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2692 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 158 IPR013083 -
Acco06g2692 183 Pfam Ring finger domain 111 154 IPR001841 -
Acco06g2692 183 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Acco06g2692 183 SMART ring_2 112 153 IPR001841 -
Acco06g2692 183 SUPERFAMILY RING/U-box 111 159 - -
Acco06g2692 183 PANTHER RING-H2 FINGER PROTEIN ATL67 5 182 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2692 Acco-ChrAcco06 27702826 27703377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2692 85 180 C3H Transcription Factor Family AT2G35910 53.125 3.24e-32 113