Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2679 ATGGAACAATCAGAACACACAACCAGTGATCCCAGCCACAACTACCTACAACAACATCGTCAGCTTCAGCGTTATCATCAAAATCAGTTACAGTTAGCTTCGTCGCAGGCTGTGGTCCCTTTCAATGGAGGAGAAGGTCCCTCATGTTTCATCAATTTGGGCCCCACTTCCATCCAAGCTGGCCTCTCTAGTGGCGGTGTTGTAACTACAACTCCTTCCTTGTCACCATCACCATCTTCTTGGGCTCCAGTTCCTCTCGTAGCGCCGCTTGCCATCTTCGTTTCTAGATCTGATCAGCCACACTCATCTGCACGATCGGGCGGAAATGTGCTCGATCCGATCAGGACACAACAACAAGGTCATCAGCAGCAACAGAAGTCGATTTCTGCAGCCACGGTGGCGAGGGATGTTGTAGCTGCGTCGACGAACCCGCCACCGCTGAGAACCAGGGACAGACACGTCAAGGTGGATGGTCGTGGCCGCAGAATCCGAATACCAGCAGCTTGTGCGGCTAGGGTTTTTCAATTAACCAGAGATCTGGGCCATAGGTCCGACGGAGAGACCATCGAGTGGCTTCTGCGACAGGCGGAGCCATTAATCATCGCCGCCACTGGCACCGGCGTGAGGCCCTCAAACTTCTCAACAACGCTCAACCTGTCGTCACAATGGAACAGTGGTTCTTCCACAGTCTTGGCTCCGCCGTCGATGTCTTCTCCATATACATTCAATGGAGTTCTACCTCTCTCTGCTCATCAGCATCATCAACATTACGAAGATCCGTTTCTGCATTCTACCTTGTTAGGGTTGCAGCAGCCTCAGCCTCATCAACAACAAGAGTATCAACAGCTTCATTTATTGACATCCGGTCAAATTTCAGAAGCGCTTCCCAATGCCGCTGGTGGAGAAGAAGACAACGGAGAACCGACTGAGAGTCATATGAGAAAACGTTACCGAGAAGATTTATTCAAAGAAGACGCTAACCAACAAGAACAAAGCCAATCTGTAGGCAATGATGATCAGGATTCTTCCATAACTTTATTACCTGACGTGCAATTGCAGAAAGTGGGATCTTTTTCGAGTTTGAACGTCCTTCGTCCGGCTACCAATGTTCTCCCCACCACTCCTATGTGGGTGGTGCCAAGCGGTAGTGGCGGCGGTGGCGGAGCTGTGAGTAGCGCATTTTGGATGCTGACCTCCGGGAGTGGAGGTGCAGGTGTGGGCACCGCAGCAGACAGCGGCGGTTCTATGTTATTTACCACCGAGCAGACCGGTGGCGGTGATGGAAGCATGAATCATCACTTTCAAGCAGCAGGCCCGCTGCAATTCATGCCGAGTTCGAATTTGGGCCATGGAAGTGTGGAATTTCAAGGTCTGCAACAGGCACCAACGACGTCTGTTTTTGTGACTAATTATCATCAGATGTTGGATGATCAGTCCAACATGGCGGCAACTGCATTGAATGCGTTTCCTGGTAGTGTTGAAGATGTGAATCCAGAGGACCTTCATCATTATGAAGCTGGTGATAATGGCGACGAAAGTGGTTAA 1545 0.5055 MEQSEHTTSDPSHNYLQQHRQLQRYHQNQLQLASSQAVVPFNGGEGPSCFINLGPTSIQAGLSSGGVVTTTPSLSPSPSSWAPVPLVAPLAIFVSRSDQPHSSARSGGNVLDPIRTQQQGHQQQQKSISAATVARDVVAASTNPPPLRTRDRHVKVDGRGRRIRIPAACAARVFQLTRDLGHRSDGETIEWLLRQAEPLIIAATGTGVRPSNFSTTLNLSSQWNSGSSTVLAPPSMSSPYTFNGVLPLSAHQHHQHYEDPFLHSTLLGLQQPQPHQQQEYQQLHLLTSGQISEALPNAAGGEEDNGEPTESHMRKRYREDLFKEDANQQEQSQSVGNDDQDSSITLLPDVQLQKVGSFSSLNVLRPATNVLPTTPMWVVPSGSGGGGGAVSSAFWMLTSGSGGAGVGTAADSGGSMLFTTEQTGGGDGSMNHHFQAAGPLQFMPSSNLGHGSVEFQGLQQAPTTSVFVTNYHQMLDDQSNMAATALNAFPGSVEDVNPEDLHHYEAGDNGDESG 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2679 514 MobiDBLite consensus disorder prediction 98 130 - -
Acco06g2679 514 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 107 462 IPR005333 GO:0003700
Acco06g2679 514 Pfam TCP family transcription factor 149 320 IPR017887 -
Acco06g2679 514 ProSiteProfiles TCP domain profile. 149 203 IPR017887 -
Acco06g2679 514 MobiDBLite consensus disorder prediction 496 514 - -
Acco06g2679 514 MobiDBLite consensus disorder prediction 493 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2679 Acco-ChrAcco06 26982750 26984294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2679 149 403 TCP Transcription Factor Family AT1G35560 39.544 5.82e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco06g2679 TCP 8.3e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2679 06 26982750 26984294 Acco06g2679 06 26982750 26984294 ECH