Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2669 ATGGGTTGTATATGCTCGAAAGCGAATTCTTCAAATGACTATGTTGCTGAGAACCATGCTAGAGACAAGGATACTAAGGCAAATAGAATCTCAAAACATTTGAGTTCCGGAGAGAAGGTCGCAATAGAGGCTGATGGTAGTGGTAATGATGCGACTACGAGGTTGATATCTAATCCGTCTCGTGATGGAACTTCAGGGTCCACTTCCGTGTCATCAGATGAGGGAGAGAAGAACGGAGAAACTGAAACTACTGCCAAGCCTGCAAAACAGCTGGTTCATATAGGCTCAAACATGGGAATTGGAAATGGAGAACAAGGACAACCTAAAATGGCTAGGATAGTTACTTTACCTAAAGGAGAAAGAGGAGCTCAAGTTCTTGCTGGCTGGCCTTCTTGGCTTACTGCAGTTGCAGGGGAAGCCATTAATGGTTGGATACCTCGCAGAGCAGATTCATATGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGTGTTTACAGAGCTCGAGATCTAGAAACAAACAAAATTGTTGCATTGAAGAAGGTTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGGGAAATTATTGTACTGCGAAGGCTTAATCATCCAAATGTCATGAAACTTGAAGGCATCATTACTTCACGGGTCTCGGGTAGCTTGTATCTTGTTTTTGAATACATGGAACATGATCTTGCAGGGCTTTCAGCAACACCTGGCATCAAGTTCTCTGAAGGGCAGATCAAATGTTATATGCAGCAGTTGCTTCGAGGTATTGAGCATTGCCACAGTCATGGTGTTCTGCATCGAGATATCAAGGGCTCAAATCTTCTGATTGACAGGAATGGCAATCTAAAGATTGGTGATTTTGGGCTAGCAACTTTCTTTGAGCCCTCTAAGGCTCAGGTTTTGACAAGTCGTGTGGTAACCTTGTGGTACCGACCACCTGAACTCCTACTGGGAGCCACAAATTATGGAGTTGCAGTGGACTTGTGGAGTGCTGGTTGCATTCTCGCGGAGTTGTTTACCGGAAAGCCTATAATGCCTGGACGAACAGAGGTGGAACAGCTTCACAAAATCTTCAAACTCTGCGGATCACCGTCTGAGGAATACTGGAAGAAGTCGAAGTTGCCGCATGCAACAATTTTCAAACCTCAACATCCCTACAAACGTGTTGTTGCTGAGACATTTAAGGATTTTCCTCCATCAGCATTAAGCCTTTTGGAAGTCCTCCTTGCTATTGAACCAGAGGATCGAAGAACTGCTTCTTCAGCACTTCAGAGTGAGTTCTTTACTACAAAGCCCCTTCCTTGTGATCCTTCAGCTTTGCCAAAATATCCACCAAGTAAGGAGTTTGATGTCAAGTTCCGACAAGAAGAAGCCAGAAGACGTAGAGCTGCAAATAATAAAGGAAATGCAGAGGAATCAGCTAACAAGGTTTCCAAAGAATCTAAAGCCGTTCCAGCACCTGATGCCAATGCTGAGTTACGGTCATCAATTGAGAAGAGACAAGGGCAGGCTAACCCTAAATGTATCAGCGAGAAGTTCAATCCTGACGAGGATGGTGGTTTTGGCTTCCCTAACGAACCTTCAAAGACAAGAGCACTCAATGCCTTCTCTCATTCTGGTCAGTCAATGCATCCAAGCGTATATGGATCTTCCCGCAATATGAATTCGAACAAGGAAGAGTCCATTGCTGGCCCTGGCCGTGTCTATAATTCAGGAAATCCTGCAGAGTTGAGAAAACAGAGATCCTATATGAACAAAAATGCCGCCCAATTATCAAGATTTTCTAATTCAGTTGCTAATGGAGGAGGTTTAAAGCTTGATATGAGTGGAGATGCTAGTGTGAGTTCACAGTGGCCTGATGATTGCTTTGGCACACGATACGACCATATAGTTGATGACGAATCCAACCAATTGCTCAAGTCTTTGCACAAGAAGGACATGCATCCTTCCATAAAGGAGCCTTCCAAGGCATTTGCCCCAAAAACCGGTCAAGTGTACTATTCAGGGCCACTAGTCCCTGGAGGTGAAAATCTTGATGAAATGCTTAAGGAGCATGAAAGGCAAATCCAACAGGCCGTCCGCAAGGCACGCTCAGATAAAGTCAAGATCAGTAAATGTGGCAATGACAATGGCCAAACTGAGTCCCTACTTCACCATGCAGGAAATCGCTAG 2196 0.4435 MGCICSKANSSNDYVAENHARDKDTKANRISKHLSSGEKVAIEADGSGNDATTRLISNPSRDGTSGSTSVSSDEGEKNGETETTAKPAKQLVHIGSNMGIGNGEQGQPKMARIVTLPKGERGAQVLAGWPSWLTAVAGEAINGWIPRRADSYEKLEKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREIIVLRRLNHPNVMKLEGIITSRVSGSLYLVFEYMEHDLAGLSATPGIKFSEGQIKCYMQQLLRGIEHCHSHGVLHRDIKGSNLLIDRNGNLKIGDFGLATFFEPSKAQVLTSRVVTLWYRPPELLLGATNYGVAVDLWSAGCILAELFTGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRVVAETFKDFPPSALSLLEVLLAIEPEDRRTASSALQSEFFTTKPLPCDPSALPKYPPSKEFDVKFRQEEARRRRAANNKGNAEESANKVSKESKAVPAPDANAELRSSIEKRQGQANPKCISEKFNPDEDGGFGFPNEPSKTRALNAFSHSGQSMHPSVYGSSRNMNSNKEESIAGPGRVYNSGNPAELRKQRSYMNKNAAQLSRFSNSVANGGGLKLDMSGDASVSSQWPDDCFGTRYDHIVDDESNQLLKSLHKKDMHPSIKEPSKAFAPKTGQVYYSGPLVPGGENLDEMLKEHERQIQQAVRKARSDKVKISKCGNDNGQTESLLHHAGNR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2669 731 MobiDBLite consensus disorder prediction 1 15 - -
Acco06g2669 731 Coils Coil 683 710 - -
Acco06g2669 731 Gene3D Transferase(Phosphotransferase) domain 1 240 476 - -
Acco06g2669 731 PANTHER CELL DIVISION PROTEIN KINASE 150 442 - -
Acco06g2669 731 Pfam Protein kinase domain 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2669 731 MobiDBLite consensus disorder prediction 1 106 - -
Acco06g2669 731 MobiDBLite consensus disorder prediction 50 74 - -
Acco06g2669 731 MobiDBLite consensus disorder prediction 16 39 - -
Acco06g2669 731 ProSiteProfiles Protein kinase domain profile. 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2669 731 MobiDBLite consensus disorder prediction 713 731 - -
Acco06g2669 731 MobiDBLite consensus disorder prediction 701 731 - -
Acco06g2669 731 SMART serkin_6 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2669 731 SUPERFAMILY Protein kinase-like (PK-like) 145 444 IPR011009 -
Acco06g2669 731 MobiDBLite consensus disorder prediction 465 525 - -
Acco06g2669 731 FunFam probable serine/threonine-protein kinase At1g54610 139 234 - -
Acco06g2669 731 CDD STKc_CDK9_like 152 436 - -
Acco06g2669 731 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Acco06g2669 731 Gene3D Phosphorylase Kinase; domain 1 147 239 - -
Acco06g2669 731 FunFam probable serine/threonine-protein kinase At1g54610 235 476 - -
Acco06g2669 731 MobiDBLite consensus disorder prediction 465 486 - -
Acco06g2669 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2669 Acco-ChrAcco06 26790997 26795452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2669 144 472 Core Cell Cycle Gene Families AT5G10270 51.453 1.02e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco06g2669 Pkinase 2.6e-71 CL0016