Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2659 ATGGCCAGAGTTTCTACATCTGTATCTCCGAAACCTGGGGAATGGGTGAAGGGAACAGTGGTTGGATCTGGATCTTTTGGTACTGTTCATTTAGCCATGAGCAAATCCACAGGAAGACTCTTTGTTGTTAAATCAACACATACAAGGGCTGAATTTGCAGCTTTAGAGAATGAGGTTGAGATTCTCAAGAATCTAGAACCATCTCCTTATATAGTCCAATACTTAGGGTCAGAGAGAGATGGACATGATCTCAAAGTTCTAATGGAGTACATGGCTGGGGGTAGTTTGGCTGATATTACAGAGAAATTTGGTGGATCATTACAAGAAGATGTGGTTCGTTTGTACACAAAAGAAATTCTTAAAGGACTCAACTTTCTTCATGGTAATGGGATTGTACACTGTGACCTTAAGTGCAAAAATGTGCTTCTGGGGTCTTGTGGGGACATCAAATTGGCAGATTTTGGATGTGCAAGGAAGGTGGAGGACTTGAAAAATGAAGGTTTGATGAAGAAGAAGAAGAACAACAAGTCTTTGGAATGTGTTAGTGGGACCCCTCTATGGATGGCTCCTGAAGTTTTGAGGAATGAGAAGCTTGATTTTGCTGCTGATATATGGTCTTTGGGGTGTACTGTTATTGAAATGGCTACTGGTAGGCCTCCTTGGGGTGCTTCTAAGTATGATTCAAACCCAATGGCCCTTCTTTTGAAGATTTCTTTGGGTGATGAGATACCGAAACTACCAACCCATTTTTCAAAGGAGGGTTTCGATTTTTTGAGGAAGTGTTTTGAGAGAGACTCAAGAAAAAGGTGGACATGTGAGCAATTACTTAGGCACCCATTTGTGTCAAGGGATTGTTCATCTGTTGCAAAAACTCCACTACAACCATCTTCACCCAAAGAAGAAACTGCTTTCTCACCTATCAGTGTGTTGGGGATTACAGATTTTGATGATGCTTGTGATGAAATAATGGATGAACCAGAAAGTCCAGAGGGAAATGATTTCTCAGTCATAAATCCATTCACATGTTGCAAAGATGGAAGAAAGGGAGAAAGTGCAATTCCATGGCATGGAGATGAATGTGCATTATGTTCATCTCAGAATTGGATTAATGTCAGATCATAG 1122 0.4073 MARVSTSVSPKPGEWVKGTVVGSGSFGTVHLAMSKSTGRLFVVKSTHTRAEFAALENEVEILKNLEPSPYIVQYLGSERDGHDLKVLMEYMAGGSLADITEKFGGSLQEDVVRLYTKEILKGLNFLHGNGIVHCDLKCKNVLLGSCGDIKLADFGCARKVEDLKNEGLMKKKKNNKSLECVSGTPLWMAPEVLRNEKLDFAADIWSLGCTVIEMATGRPPWGASKYDSNPMALLLKISLGDEIPKLPTHFSKEGFDFLRKCFERDSRKRWTCEQLLRHPFVSRDCSSVAKTPLQPSSPKEETAFSPISVLGITDFDDACDEIMDEPESPEGNDFSVINPFTCCKDGRKGESAIPWHGDECALCSSQNWINVRS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2659 373 Pfam Protein kinase domain 17 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2659 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Acco06g2659 373 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Acco06g2659 373 SUPERFAMILY Protein kinase-like (PK-like) 13 303 IPR011009 -
Acco06g2659 373 CDD STKc_MAPKKK 14 281 - -
Acco06g2659 373 Gene3D Transferase(Phosphotransferase) domain 1 12 322 - -
Acco06g2659 373 SMART serkin_6 15 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2659 373 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 14 303 - -
Acco06g2659 373 ProSiteProfiles Protein kinase domain profile. 15 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2659 Acco-ChrAcco06 26468730 26469851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2659 5 298 MAP Kinase Kinase Kinase AT5G55090 45.395 3.00e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco06g2659 Pkinase 1.1e-62 CL0016