Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2639 ATGGCGTCTGCTAGCCTTGGAAATGGTGGGGCCAGCAGTTCAAGGTCTGTTAATGGCTTCAGGGGTTCATCTAGTTCAGTGGATTGGCTTGGGCAAGAGATGCTTGAATTGAGGCTGAGGGACAAGACTGACCATGAAGACGACAGAGAAAGTGAGCCTGACATCATTGATGGTGTTGGTACCGAAACAGGACGTGTGATAAGAACTAGCATTGGTGGTCGAAATGGTCAATCTAAGCAGAATGTCAGCTACATTGCAGAGCATGTGGTTGGAACAGGCTCTTTTGGTGTTGTCTTTCAGGCTAAATGTAGAGAAACTGGAGAGATTGTAGCCATCAAGAAGGTTCTCCAGGACAAGCGCTACAAAAACAGAGAGTTACAGATTATGCAAATGCTGGATCATCCAAATATTGTTGCCCTTAAGCATTGCTTCTTTTCATCAACTGACAAAGAAGAGGTTTACTTGAATCTTGTGCTTGAATATGTTCCAGAAACTGTTTACCGTATTGCAAGGAACTATAGCAGGATGAATCAGCGAATGCCTTTAATATATGTCAAGCTATATACCTACCAGATTTGCAGGGCCCTTGCTTATATACATAACTGTATTGGAATATGTCATCGTGACATTAAACCTCAGAACTTACTCGTGAATCCACACACACATCAACTAAAACTTTGTGATTTTGGAAGCGCAAAAGTGTTGGTGAAAGGAGAAACAAATGTTTCTTATATCTGTTCAAGATATTACCGGGCTCCAGAACTCATATTTGGTGCCACTGAGTATACAACTGCCATAGATATATGGTCAACTGGATGTGTGATGGCTGAACTACTTCTTGGACAGCCTTTATTTCCTGGAGAAAGCGGAGTTGATCAACTAGTTGAAATCATCAAGGTTTTGGGAACTCCAACCCGGGAAGAGATAAAATGCATGAACCCAAATTATACTGAATTCAAGTTTCCGCAGATCAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTTTGCCCCCAGAAGCAGTTGACCTTGTATGCAGATTCTTTCAGTACTCTCCCAATTTACGATGCACTGCTTTGGAAGCTTGCATTCATCCCTTCTTTGATGAATTAAGGGACCCAAACACCCGCCTTCCTAATGGCCGCCCACTTCCTCCTCTGTTTAATTTTAAATCTCAGGAGCTCACGGGTATACCGCCTGATATCGTCAATCGGCTTATTCCAGAGCATGCTCGCTGTAAATCATCTGGTGCATCTGATCAGAAAGAATTTCACAGAAAGAGTTCATAG 1290 0.4271 MASASLGNGGASSSRSVNGFRGSSSSVDWLGQEMLELRLRDKTDHEDDRESEPDIIDGVGTETGRVIRTSIGGRNGQSKQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSSTDKEEVYLNLVLEYVPETVYRIARNYSRMNQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGETNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKSQELTGIPPDIVNRLIPEHARCKSSGASDQKEFHRKSS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2639 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Acco06g2639 429 FunFam Shaggy-related protein kinase kappa 164 412 - -
Acco06g2639 429 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Acco06g2639 429 Pfam Protein kinase domain 86 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2639 429 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Acco06g2639 429 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 50 412 - -
Acco06g2639 429 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2639 429 SUPERFAMILY Protein kinase-like (PK-like) 83 395 IPR011009 -
Acco06g2639 429 Gene3D Transferase(Phosphotransferase) domain 1 164 412 - -
Acco06g2639 429 FunFam Glycogen synthase kinase-3 beta 68 163 - -
Acco06g2639 429 SMART serkin_6 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2639 429 MobiDBLite consensus disorder prediction 1 22 - -
Acco06g2639 429 CDD STKc_GSK3 79 371 IPR039192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2639 Acco-ChrAcco06 26048309 26054181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2639 90 371 Core Cell Cycle Gene Families AT1G76540 35.517 7.12e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Acco06g2639 Pkinase 9.9e-65 CL0016