LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g2621	ATGGCAGATATTAGGAAAGTGATCGAGGGGTTGAAGCCGGCGATATTAATGGTGTTGCTTCAGTTGACGTACGCCGGCATCAATGTGATGTACAAGATCGCCCTGGCCGACGGCATGAACCTGAGAATCGTCATTGCTTATCGCTATATATTCGCCACCGCCTTCCTTGCTCCTCTTGCTCTCATTCTGGAAAGGAATAAAAGACCAAAGATGACTTGGAGTATACTTTTTCAGTCATTTCTGTGCGGGGTTTTTGGAGGAGTACTGTCACAAAACTTCTTCTTGGAATCATTGGCTTTAACTTCTGCAACATTTGCTTCTGCTATGGCCAATCTAACTCCATCCATCACGTTTCTCATGGCCGCCTCCTTCGGTGTCGAAAGATTTTATTTAAGAACAGTAGCAGGACAAGTGAAGATCATTGGAACAGTAGTAGCATTAGGTGGGGCCATGATCCTAATATTCTTCAAAGGAACAAAAATAAACACGGGCTCCTTCCACGTCACCATATTGCCTCATCGAGACGGACACGTGTCATCAGTACTTGCTCCCTCTGGTATCAGGGCTCTTTTGGGTGCCCTTTCTTCACTGGGAAGCAGTGCTACCTATGCTTTATGGCTTATCATTCAGGCTAAGATGGGCAACAGTTACCCATGTTATTACTCAAGCACAGCTCTAATGAGTTTCATGTCAGCAGTCTTCTCAAGTGCACTTGCTTTTTGTCTTGAGAGGGATTTGGCTCAATGGAGGTTGGGTTGGAGTGTTAGGCTTCTCGCAGTGGCCTATGCGGGAATTGTTGTTTCTGGAATTATTACGGTGGTGATGGCATGGACTGTGGACAAGAGGGGACCTCTTTTTGTTGCTGCTTTTAACCCTCTTATGCTTCTCTTTGTGGCTATAGCTGGTCCTTTCATGTTAGACGAGAATCTATATCTGGGAAGTATACTAGGAGGGTTGTTGATAGTGTGTGGATTATACATGGTTATATGGGGAAAAGCCAAAGAGGTGAAGAACATGAAGCAACTCATTCCATCACAGAGTAGCCCCCCTGAAATCATAGTGGCTTCACTGACAGATGATAAAAAAAGCAGCCCTCATAACAACAATCTTGAGGTTGAAATTGTTAATCAGTCAATCATTGAACAAAAATTACAAGTGAAGTAG	1164	0.4407	MADIRKVIEGLKPAILMVLLQLTYAGINVMYKIALADGMNLRIVIAYRYIFATAFLAPLALILERNKRPKMTWSILFQSFLCGVFGGVLSQNFFLESLALTSATFASAMANLTPSITFLMAASFGVERFYLRTVAGQVKIIGTVVALGGAMILIFFKGTKINTGSFHVTILPHRDGHVSSVLAPSGIRALLGALSSLGSSATYALWLIIQAKMGNSYPCYYSSTALMSFMSAVFSSALAFCLERDLAQWRLGWSVRLLAVAYAGIVVSGIITVVMAWTVDKRGPLFVAAFNPLMLLFVAIAGPFMLDENLYLGSILGGLLIVCGLYMVIWGKAKEVKNMKQLIPSQSSPPEIIVASLTDDKKSSPHNNNLEVEIVNQSIIEQKLQVK	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g2621	387	Pfam	EamA-like transporter family	191	329	IPR000620	GO:0016020
	Acco06g2621	387	Pfam	EamA-like transporter family	12	145	IPR000620	GO:0016020
	Acco06g2621	387	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	245	333	-	-
	Acco06g2621	387	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	147	-	-
	Acco06g2621	387	PANTHER	WAT1-RELATED PROTEIN	13	339	IPR030184	GO:0016020\|GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g2621	Acco-ChrAcco06	25329456	25335443	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g2621	11	384	Nodulin-like Gene Family	AT1G25270	36.898	5.52e-87	266