LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g2617	ATGGCTTGTGGTGGTGTGGTGGTTGTTACGATGGCGATAACAAAGATGGCAGCTGATGTATGGAATGTAGTGCACGGCTTTAAGGCGGCCATGTTAATGGTGGTGGTTCAGATAGCATTCGCTGGCGTCAATGTCCTCTACAAACTCGCCGTCAACGACGGCATGAACCTCAGGATCGTGGTTGCGTATCGCTTCATCTTCGCCACTGTTTTCATTGCCCCTGTTGCTCTCATTCTGGAAAGGAAGAAGAGACCGAAGATGACTTGGAAGATACTGTTTCAAGCATTTCTTTGTGGTTTATTTGGAGGATCTCTGGCACAAAACTTATACTTGGAAGCATTGGCATTAACGTCAGCAACATTTGCTTCAGCAATGGCCAATCTTATTCCAGCCATCACCTTTATCATGGCCGTCTGCTTCCGGTTGGAGAGTCTAAATTTAAGAGCAGCAGCAGGAAAAGCCAAGATCATTGGAACAATAATAGCAGTAAGTGGCGCTATGATTCTAACATTCTTCAAAGGTACACAAATAGACACAGGCTCCTTCCACGTCACCCTCATGCGTCATCGTAACGGACATGTGGCATCACCACAATCCTCCCCCTCTGGTGGCAGTAACACCCTCTTAGGTGCTCTCTGTACCATGGGAAGCAATTTTAGTTATGCTCTGTGGCTCATCATTCAGACTAAGATGAGTAAGAGTTACCCGTGTCATTACTCAAGCACAGCTTTGATGAGTTTCATGGGATCACTGTTATCTATTGCTTTTGCTCTTTGCCTCGAGAGGGATTGGACTCAATGGAAGTTGGGTTGGAATGTTAGGCTTCTCACTGCTGCTTATGCGGGAATAGTGGTTTCTGGAGTAATGGTGGTGGTGATGGCTTGGTGTATGCATATGAGAGGGCCTCTTTATGTATCTGCTTTCAATCCTCTTTTGCTTGTCTTTGTGGCATTGGCTGGCTCTTTCATGTTAGATGAGAAGCTACATCTTGGAAGTATAATTGGTGGGGCATTGATAATCTGTGGATTATATGCGGTTCTATGGGGAAAAGGCAAAGAGATGAAGAAGATGAATCAACTTGTTCCATCTGATCAGGGGCTTCATGAAATCATAGTGGCATCTCCTACAGAGGATAATAAATGTGCCCTACACACCACTACCATCAACAACTCAGTTGAAGAAGTTGTTAAAGATAGTGATCATTAA	1206	0.4469	MACGGVVVVTMAITKMAADVWNVVHGFKAAMLMVVVQIAFAGVNVLYKLAVNDGMNLRIVVAYRFIFATVFIAPVALILERKKRPKMTWKILFQAFLCGLFGGSLAQNLYLEALALTSATFASAMANLIPAITFIMAVCFRLESLNLRAAAGKAKIIGTIIAVSGAMILTFFKGTQIDTGSFHVTLMRHRNGHVASPQSSPSGGSNTLLGALCTMGSNFSYALWLIIQTKMSKSYPCHYSSTALMSFMGSLLSIAFALCLERDWTQWKLGWNVRLLTAAYAGIVVSGVMVVVMAWCMHMRGPLYVSAFNPLLLVFVALAGSFMLDEKLHLGSIIGGALIICGLYAVLWGKGKEMKKMNQLVPSDQGLHEIIVASPTEDNKCALHTTTINNSVEEVVKDSDH	401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g2617	401	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	251	352	-	-
	Acco06g2617	401	PANTHER	WAT1-RELATED PROTEIN	29	357	IPR030184	GO:0016020\|GO:0022857
	Acco06g2617	401	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	63	163	-	-
	Acco06g2617	401	Pfam	EamA-like transporter family	209	347	IPR000620	GO:0016020
	Acco06g2617	401	Pfam	EamA-like transporter family	29	169	IPR000620	GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g2617	Acco-ChrAcco06	25133577	25139594	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g2617	28	355	Nodulin-like Gene Family	AT1G25270	45.732	3.87e-103	308