Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2605 ATGACCCACATTGTCCGAGAAGTTGAGAAACCTGGATCAAAGCTTCATAAGAAGGAGACTTGTGAGGCTGTCACTGTTGTTGAAACTCCTCCAATGGTTGTTGTTGGAGTTGTTGGATATTTGAAGACTCCTCGCGGACTTCGCACCTTAAATACAGTCTGGGCTCAGCATCTAAGTGAGGAAGTTAAAAGGCGATTCTACAAAAACTGGTGCAAGTCTAAGAAGAAGGCATTTACCAAATATTCAAAGAAACACGAAACTGATGAAGGGAAGAAGGATATTCAAGCACAGCTGGAAAAATTGAAGAAATATGCATCTGTCATCCGTGTTTTGGCACATACTCAGATACGGAAGGTGAAGGGTCTGAAGCAAAAGAAGGCACATCTGATGGAGATCCAAGTTAATGGTGGGACAATAGCACAGAAGGTAGACTTTGCATATGGCTTCTTTGAGAAGCAAATCCCTGTGGATGCTGTTTTCCAGAAAGATGAGATGATAGATATCATTGGTGTGACGAAGGGTAAAGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTCACTCGCCTTCCCCGCAAGACACACAGGGGTCTAAGAAAGGTTGCTTGTATTGGTGCATGGCACCCTGCCCGAGTTTCTTTCACAGTTGCCAGGGCTGGTCAAAATGGATACCATCACCGTACTGAGTTGAACAAGAAGATCTACAAGGTTGGCAAGGCAGGGGATGAGTCACACTCGGCCATTACTGATTTTGACAGGACTGAGAAGGACATCACTCCAATGGGTGGATTCCCACACTATGGTGTGGTGAAGGAAGATTTTATTATGATCAGGGGAGGCTGTGTGGGGCCCAAGAAGCGTGTGCTGACCCTTCGACAGTCACTACTGAAGCAAACTTCTCGTGTGGCCCTTGAGGAGATCAAGCTCAAGTTCATCGACACTTCCTCCAAGTTTGGACATGGTCGCTTCCAGACCACCCAGGAGAAACAGAAGTTCTATGGTCGCTTGAAGGCCTGA 1014 0.4625 MTHIVREVEKPGSKLHKKETCEAVTVVETPPMVVVGVVGYLKTPRGLRTLNTVWAQHLSEEVKRRFYKNWCKSKKKAFTKYSKKHETDEGKKDIQAQLEKLKKYASVIRVLAHTQIRKVKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKAGDESHSAITDFDRTEKDITPMGGFPHYGVVKEDFIMIRGGCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2605 337 ProSitePatterns Ribosomal protein L3 signature. 160 183 IPR019926 -
Acco06g2605 337 FunFam Ribosomal protein L3 213 337 - -
Acco06g2605 337 Pfam Ribosomal protein L3 1 318 IPR000597 GO:0003735|GO:0005840|GO:0006412
Acco06g2605 337 Gene3D - 31 155 - -
Acco06g2605 337 SUPERFAMILY Translation proteins 1 318 IPR009000 -
Acco06g2605 337 FunFam 60S ribosomal protein L3 31 155 - -
Acco06g2605 337 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 332 IPR045077 GO:0003735|GO:0005840|GO:0006412
Acco06g2605 337 Gene3D Translation factors 1 333 - -
Acco06g2605 337 FunFam 60S ribosomal protein L3 174 222 - -
Acco06g2605 337 Gene3D Ribosomal protein L3, domain 3 174 222 IPR044892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2605 Acco-ChrAcco06 24745808 24747291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2605 1 334 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 85.030 0.0 590