Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2602 ATGGGTAGATCAGTGGAAAAAGAAGACAAACAGACGCAGAAAATGGATCTCTCTTTGCACATTGATCATCATACGTCTGAACCTGAAGAAGCAGATCATGAGGTAGAAGAAGAAGAAGAAGACGATGATGATGATAAGGAAGAAATGGCGAGAGCAGCTAAGGTTGACGAAGAAGAAGAAGAAGCTCCTCATGAAGCCGCCATGGCTGCAGGAGATCAGATAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATAATGGTTCAATGGTAGAGAACACTAAAGCAAGAGAGGAGTTAAGTTTGTTACAAGTGGAGACCGATCGCATGAAAGAAGAAAACGAAGTCTTAAGGAAAGTGGTGGAGCGAACCATGAAAGACTACTACGATCTACAGATGAAATTCGCAATCATCCAGCAGAACCACAGCAATAAACACAAGGAGCCTCAGATCTCTCTCTCACTTGAAAACAATAGTAAGGATGATCATATGAAGAAGATTGGATTGGGATTATCTCTGAGGTTAGAGACAAGTGGTACAAGTGAAGCAGACCAAGATCAATTAGAAGAGTCCAAGTATAATAAGGAATTATTACAAGAATTGACAAGTTTTGGGACATTATTATCATCAGTGCAAAACAAAATACCTCAGACTATTCATCATCATCATCATGAGTCGCCTGGTATCACTAATAATGCTGGCCACGTTGCTTCTTCATCACCTCCAAATAAGAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAGCTGCCACTATGAATGATGGGTGTCAATGGAGAAAATATGGACAAAAGATTTCCAAAGGGAATCCATGCCCTCGTGCCTATTATCGTTGCACTGTTGCCCCTGGCTGTCCCGTAAGAAAGCAGGTACAGAGGTGCTTAGAGGACATGTCGATACTAATCACAACATACGAAGGAACACACAACCATCCTCTTCCTGTAGGTGCGACAGCCATGGCTTCCACTGCTTATGCTGCTCATTACCACAACACCAACACCACCTTCTTCCCATCATCATCATCAAACCCTAATCATAATAATATTGACCCTTCGAAAGGACTCGTCCTCGATCTAACGTCATCTTCATCTTCTTCACCACCCACATTTTCTTGGCCCCCAAACACTACACCCTTCGTCAATAATAATATTTTCCCCACTTCTTCTTCTTCTGGGGATCATCATCATCATAGTGTGTCTGCGATTGCTTCAGATCCTAAGTTCAGGGTTGCTGTGGCGGCTGCAATAACATCTTTCATTAATAACAAAGACATTAATCATAGTAATAGTGTTCATAATAATAACAATGGAAGCTCTGGTAGTGGCGACAGCAACAGATGGATCTTAGAGTCCCTCTCATCATCACCAAAAGGGAAAACCCATCAGTTTTAA 1410 0.417 MGRSVEKEDKQTQKMDLSLHIDHHTSEPEEADHEVEEEEEDDDDDKEEMARAAKVDEEEEEAPHEAAMAAGDQIEEEEEEEEEEEDNGSMVENTKAREELSLLQVETDRMKEENEVLRKVVERTMKDYYDLQMKFAIIQQNHSNKHKEPQISLSLENNSKDDHMKKIGLGLSLRLETSGTSEADQDQLEESKYNKELLQELTSFGTLLSSVQNKIPQTIHHHHHESPGITNNAGHVASSSPPNKKARVSVRARCEAATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYAAHYHNTNTTFFPSSSSNPNHNNIDPSKGLVLDLTSSSSSSPPTFSWPPNTTPFVNNNIFPTSSSSGDHHHHSVSAIASDPKFRVAVAAAITSFINNKDINHSNSVHNNNNGSSGSGDSNRWILESLSSSPKGKTHQF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2602 469 MobiDBLite consensus disorder prediction 31 46 - -
Acco06g2602 469 ProSiteProfiles WRKY domain profile. 254 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g2602 469 SMART WRKY_cls 259 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g2602 469 Coils Coil 64 113 - -
Acco06g2602 469 FunFam probable WRKY transcription factor 31 244 321 - -
Acco06g2602 469 Gene3D WRKY domain 244 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g2602 469 MobiDBLite consensus disorder prediction 219 244 - -
Acco06g2602 469 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 61 440 IPR044810 GO:0003700
Acco06g2602 469 MobiDBLite consensus disorder prediction 430 469 - -
Acco06g2602 469 Pfam WRKY DNA -binding domain 260 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g2602 469 MobiDBLite consensus disorder prediction 1 95 - -
Acco06g2602 469 MobiDBLite consensus disorder prediction 47 66 - -
Acco06g2602 469 SUPERFAMILY WRKY DNA-binding domain 252 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g2602 469 MobiDBLite consensus disorder prediction 72 88 - -
Acco06g2602 469 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2602 Acco-ChrAcco06 24650876 24655696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2602 69 352 WRKY Transcription Factor Family AT1G68150 48.845 3.42e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g2602 WRKY 3.9e-24 CL0274